Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR582-201ENST00000365731 98 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 RNU6-400P-201ENST00000391173 106 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 SNORD75.2-201ENST00000408784 58 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.77□□□□□ -2.53
HSPG2P98160 FGF7P6-202ENST00000451282 293 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 MTND3P7-201ENST00000474435 343 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 SEPT14P4-201ENST00000513445 186 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 MIR4756-201ENST00000577874 78 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 MIR190B-201ENST00000401119 79 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 SNORD42A-201ENST00000459584 64 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AC068339.1-201ENST00000526965 141 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 MIR376A2-201ENST00000636782 80 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 RNU4-10P-201ENST00000364383 140 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 SNORA32-201ENST00000384072 121 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AL353193.1-201ENST00000421444 268 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.77□□□□□ -2.53
HSPG2P98160 MIR4308-201ENST00000580634 81 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 MIR4273-201ENST00000582824 84 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AC060780.3-201ENST00000589464 80 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 AC005014.3-201ENST00000605985 190 ntBASIC-0.77□□□□□ -2.53
HSPG2P98160 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-20P-201ENST00000384106 107 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.78□□□□□ -2.53
HSPG2P98160 AL590004.1-201ENST00000405321 300 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 SNORA22.1-201ENST00000362701 134 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNY1P6-201ENST00000384193 109 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU2-51P-201ENST00000410708 197 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 MIR4500-201ENST00000579472 76 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 MIR548AE2-201ENST00000583456 67 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 MIR548AM-201ENST00000584298 74 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC097520.1-201ENST00000624435 385 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNY4P34-201ENST00000364779 95 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 SNORD77B-201ENST00000391112 67 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.78□□□□□ -2.53
HSPG2P98160 MTND2P22-201ENST00000444325 1033 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC090616.4-201ENST00000448026 115 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU7-195P-201ENST00000458793 62 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU7-63P-201ENST00000459054 62 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-397P-201ENST00000516226 104 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC087741.2-201ENST00000619415 172 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC006927.3-201ENST00000638789 384 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 SNORD63-201ENST00000384262 68 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC098826.2-201ENST00000452011 651 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-168P-201ENST00000516189 101 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 MIR5197-201ENST00000583721 112 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 AC092794.2-201ENST00000620933 563 ntBASIC-0.78□□□□□ -2.53
HSPG2P98160 RNU6-874P-201ENST00000362390 105 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-524P-201ENST00000384270 107 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 MIR548E-201ENST00000408287 88 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 MTND1P34-201ENST00000438556 671 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 SNORA19.3-201ENST00000516165 130 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.79□□□□□ -2.54
HSPG2P98160 AC024933.1-201ENST00000608472 348 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-282P-201ENST00000365357 103 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-157P-201ENST00000383957 107 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-746P-201ENST00000384112 109 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6-95P-201ENST00000384697 107 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 AL161932.1-201ENST00000437408 146 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 AC060788.1-201ENST00000521318 469 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 MIR4790-201ENST00000577799 79 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 AP001362.1-201ENST00000625165 124 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 TPTEP1-208ENST00000636884 213 ntBASIC-0.79□□□□□ -2.54
HSPG2P98160 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 U3.27-201ENST00000391237 200 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU7-187P-201ENST00000458985 68 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AC006504.6-201ENST00000590142 199 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AP001542.1-201ENST00000591314 200 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AC007485.1-201ENST00000616755 206 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.8□□□□□ -2.54
HSPG2P98160 MIR6841-201ENST00000637129 72 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 SNORD36A-201ENST00000362874 73 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms