Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-592P-201ENST00000411333 103 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU6-445P-201ENST00000516949 107 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 RNU1-54P-201ENST00000517181 120 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 AL603910.2-201ENST00000407268 136 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 AC006006.1-201ENST00000603082 144 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 AC005014.3-201ENST00000605985 190 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 AC007485.1-201ENST00000616755 206 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 AC099654.14-201ENST00000638599 341 ntBASIC-1.32□□□□□ -2.62
PRKDCP78527 SNORA22.1-201ENST00000362701 134 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 SNORD77B-201ENST00000391112 67 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 RNU6-938P-201ENST00000411285 103 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 MTND3P1-201ENST00000441336 220 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 FGF7P6-202ENST00000451282 293 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 MTND1P34-201ENST00000438556 671 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.33□□□□□ -2.62
PRKDCP78527 AL356010.1-201ENST00000456364 102 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.33□□□□□ -2.62
PRKDCP78527 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.33□□□□□ -2.62
PRKDCP78527 RNA5SP26-201ENST00000362406 119 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 RNU6-879P-201ENST00000364328 108 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 SNORD38.2-201ENST00000384470 69 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 MIR4703-201ENST00000577728 79 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 AL589826.1-201ENST00000340697 249 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 RNU6-159P-201ENST00000391080 106 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.34□□□□□ -2.62
PRKDCP78527 SEPT14P4-201ENST00000513445 186 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 SNORD67.1-201ENST00000516618 108 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 AC006927.3-201ENST00000638789 384 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 RNU6-282P-201ENST00000365357 103 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.34□□□□□ -2.62
PRKDCP78527 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 U4.1-201ENST00000620349 87 ntBASIC-1.34□□□□□ -2.62
PRKDCP78527 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 SNORD50.1-201ENST00000362987 71 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 SNORA63.6-201ENST00000364921 119 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNY3P4-201ENST00000384428 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 AL359881.1-201ENST00000602916 267 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 AC004467.1-201ENST00000615678 330 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 AC099654.13-201ENST00000639774 207 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 AC021613.1-201ENST00000623880 111 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNY1P6-201ENST00000384193 109 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-155P-201ENST00000516347 100 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-762P-201ENST00000517107 102 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.35□□□□□ -2.63
PRKDCP78527 RNU6-400P-201ENST00000391173 106 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 SNORD63B-201ENST00000411005 70 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU7-45P-201ENST00000459460 63 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU6-397P-201ENST00000516226 104 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 MIR5696-201ENST00000578474 85 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 MIR3920-201ENST00000581751 86 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU7-63P-201ENST00000459054 62 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU7-180P-201ENST00000459240 63 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 U7.5-201ENST00000517224 61 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 MIR487B-201ENST00000385021 84 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 AC091951.2-201ENST00000500762 203 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 AC024909.2-201ENST00000553035 286 ntBASIC-1.36□□□□□ -2.63
PRKDCP78527 RNU6-961P-201ENST00000363893 105 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC024933.1-201ENST00000608472 348 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC097520.1-201ENST00000624435 385 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 RNY4P34-201ENST00000364779 95 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 SNORD115-20-201ENST00000365099 82 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 SNORA32-201ENST00000384072 121 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 MTND2P22-201ENST00000444325 1033 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC090616.4-201ENST00000448026 115 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC006504.6-201ENST00000590142 199 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AL158063.1-201ENST00000615349 536 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 SNORD63-201ENST00000384262 68 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 RNU6-906P-201ENST00000384700 70 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 RNU6-258P-201ENST00000390884 101 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC098826.2-201ENST00000452011 651 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 AC133104.2-201ENST00000615272 193 ntBASIC-1.37□□□□□ -2.63
PRKDCP78527 RNY4P9-201ENST00000363194 97 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 SNORD75.2-201ENST00000408784 58 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms