Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNY4P36-201ENST00000391116 96 ntBASIC-1.89□□□□□ -2.71
RPS28P62857 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.89□□□□□ -2.71
RPS28P62857 RNU7-195P-201ENST00000458793 62 ntBASIC-1.89□□□□□ -2.71
RPS28P62857 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.89□□□□□ -2.71
RPS28P62857 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.89□□□□□ -2.71
RPS28P62857 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 RNU6-429P-201ENST00000384582 108 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 MIRLET7B-201ENST00000385140 83 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 RNU6-308P-201ENST00000390957 107 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 MTND3P12-201ENST00000559068 328 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 MIR3145-201ENST00000580727 82 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 MIR6773-201ENST00000612812 74 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 AC092794.2-201ENST00000620933 563 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 AC021613.1-201ENST00000623880 111 ntBASIC-1.9□□□□□ -2.71
RPS28P62857 MIR335-201ENST00000362173 94 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 RNU6-164P-201ENST00000364604 103 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 RNY3P4-201ENST00000384428 101 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 MIR487B-201ENST00000385021 84 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 MIR519A1-201ENST00000385257 85 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 SNORA69.1-201ENST00000390904 137 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 RNU6-337P-201ENST00000391243 106 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.91□□□□□ -2.72
RPS28P62857 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 RNU6-383P-201ENST00000410864 94 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 AC145350.1-201ENST00000567426 208 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 MIR4659A-201ENST00000580269 81 ntBASIC-1.92□□□□□ -2.72
RPS28P62857 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RNU6-144P-201ENST00000383951 107 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RN7SKP298-201ENST00000515950 94 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RNU6-720P-201ENST00000516363 108 ntBASIC-1.93□□□□□ -2.72
RPS28P62857 RNU6-228P-201ENST00000362700 106 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 RNU6-899P-201ENST00000363947 107 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 RNU6-893P-201ENST00000458841 100 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 AC024909.2-201ENST00000553035 286 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 AC009094.1-201ENST00000564443 426 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 MIR4308-201ENST00000580634 81 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 AL008718.3-201ENST00000610217 321 ntBASIC-1.94□□□□□ -2.72
RPS28P62857 MIR367-201ENST00000362299 68 ntBASIC-1.95□□□□□ -2.72
RPS28P62857 SNORA62.4-201ENST00000365504 151 ntBASIC-1.95□□□□□ -2.72
RPS28P62857 SNORA26.4-201ENST00000391188 123 ntBASIC-1.95□□□□□ -2.72
RPS28P62857 RNU6-287P-201ENST00000516230 98 ntBASIC-1.95□□□□□ -2.72
RPS28P62857 RNU7-35P-201ENST00000517174 62 ntBASIC-1.95□□□□□ -2.72
RPS28P62857 RNU4-80P-201ENST00000363200 141 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
RPS28P62857 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 AL365203.2-201ENST00000423444 196 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 MIR6888-201ENST00000621977 67 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 AC099654.14-201ENST00000638599 341 ntBASIC-1.96□□□□□ -2.72
RPS28P62857 SNORD115-33-201ENST00000363723 82 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 RNU6-801P-201ENST00000364087 105 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 SNORA53-201ENST00000391141 249 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 AL078595.1-201ENST00000404458 226 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 SNORD75.2-201ENST00000408784 58 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 SNORD63B-201ENST00000411005 70 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 HAR1A.1-201ENST00000459583 118 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 RNA5SP476-201ENST00000516613 103 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.97□□□□□ -2.72
RPS28P62857 SNORD81.1-201ENST00000363064 77 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 AC009161.1-201ENST00000417306 376 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 RNU6-732P-201ENST00000516033 103 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 RNU6-864P-201ENST00000516256 108 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 RNU7-137P-201ENST00000516788 62 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 RNU7-70P-201ENST00000516941 66 ntBASIC-1.98□□□□□ -2.73
RPS28P62857 RNU6-208P-201ENST00000362431 107 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 SNORD115-19-201ENST00000363098 82 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 SNORD115-18-201ENST00000363293 82 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 RNU4-10P-201ENST00000364383 140 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 SNORD115-22-201ENST00000364456 82 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 SNORD115-17-201ENST00000364612 82 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 SNORD115-20-201ENST00000365099 82 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.99□□□□□ -2.73
RPS28P62857 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.99□□□□□ -2.73
RPS28P62857 AC108019.1-201ENST00000512540 175 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms