Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP46P62068 RNU6-1094P-201ENST00000362416 104 ntBASIC2.72□□□□□ -1.97
USP46P62068 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
USP46P62068 SNORA6-201ENST00000384033 151 ntBASIC2.72□□□□□ -1.97
USP46P62068 MIR563-201ENST00000385080 79 ntBASIC2.72□□□□□ -1.97
USP46P62068 MIR1302-7-201ENST00000408841 72 ntBASIC2.72□□□□□ -1.97
USP46P62068 AL161935.2-201ENST00000414627 60 ntBASIC2.72□□□□□ -1.97
USP46P62068 RNU7-62P-201ENST00000458856 62 ntBASIC2.72□□□□□ -1.97
USP46P62068 MIR4264-201ENST00000583520 66 ntBASIC2.72□□□□□ -1.97
USP46P62068 AL049779.4-201ENST00000604500 156 ntBASIC2.72□□□□□ -1.97
USP46P62068 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
USP46P62068 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
USP46P62068 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
USP46P62068 MIR30D-201ENST00000362283 70 ntBASIC2.71□□□□□ -1.98
USP46P62068 RNA5SP126-201ENST00000365092 109 ntBASIC2.71□□□□□ -1.98
USP46P62068 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
USP46P62068 RNU2-19P-201ENST00000517288 84 ntBASIC2.71□□□□□ -1.98
USP46P62068 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
USP46P62068 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
USP46P62068 HSPE1P24-201ENST00000450782 238 ntBASIC2.7□□□□□ -1.98
USP46P62068 MIR4796-201ENST00000580742 81 ntBASIC2.7□□□□□ -1.98
USP46P62068 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP46P62068 RNU6-301P-201ENST00000384277 107 ntBASIC2.69□□□□□ -1.98
USP46P62068 Y_RNA.545-201ENST00000384652 105 ntBASIC2.69□□□□□ -1.98
USP46P62068 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
USP46P62068 MIR2115-201ENST00000516657 100 ntBASIC2.69□□□□□ -1.98
USP46P62068 MIR4536-1-201ENST00000583537 88 ntBASIC2.69□□□□□ -1.98
USP46P62068 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP46P62068 MIR516A2-201ENST00000384888 90 ntBASIC2.68□□□□□ -1.98
USP46P62068 MIR516A1-201ENST00000385033 90 ntBASIC2.68□□□□□ -1.98
USP46P62068 RNU6-788P-201ENST00000390967 104 ntBASIC2.68□□□□□ -1.98
USP46P62068 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
USP46P62068 AC055731.1-201ENST00000474387 401 ntBASIC2.68□□□□□ -1.98
USP46P62068 RN7SL429P-201ENST00000479090 223 ntBASIC2.68□□□□□ -1.98
USP46P62068 RN7SL489P-201ENST00000486185 223 ntBASIC2.68□□□□□ -1.98
USP46P62068 RN7SL327P-201ENST00000488659 223 ntBASIC2.68□□□□□ -1.98
USP46P62068 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.68□□□□□ -1.98
USP46P62068 RN7SL853P-201ENST00000617250 223 ntBASIC2.68□□□□□ -1.98
USP46P62068 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP46P62068 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.68□□□□□ -1.98
USP46P62068 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USP46P62068 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
USP46P62068 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
USP46P62068 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
USP46P62068 RNU6-624P-201ENST00000363411 107 ntBASIC2.67□□□□□ -1.98
USP46P62068 RNU6-811P-201ENST00000384069 107 ntBASIC2.67□□□□□ -1.98
USP46P62068 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
USP46P62068 RNU6-243P-201ENST00000391140 107 ntBASIC2.67□□□□□ -1.98
USP46P62068 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
USP46P62068 RN7SL274P-201ENST00000492268 272 ntBASIC2.67□□□□□ -1.98
USP46P62068 GHRLOS.1-201ENST00000610995 70 ntBASIC2.67□□□□□ -1.98
USP46P62068 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
USP46P62068 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP46P62068 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.66□□□□□ -1.98
USP46P62068 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
USP46P62068 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP46P62068 AC005908.1-201ENST00000468701 347 ntBASIC2.66□□□□□ -1.98
USP46P62068 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
USP46P62068 RNA5SP402-201ENST00000517148 110 ntBASIC2.66□□□□□ -1.98
USP46P62068 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
USP46P62068 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
USP46P62068 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP46P62068 RNA5SP212-201ENST00000391223 107 ntBASIC2.65□□□□□ -1.99
USP46P62068 RNU6-1254P-201ENST00000391266 104 ntBASIC2.65□□□□□ -1.99
USP46P62068 RNU6-380P-201ENST00000410207 107 ntBASIC2.65□□□□□ -1.99
USP46P62068 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.65□□□□□ -1.99
USP46P62068 uc_338.6-201ENST00000613544 171 ntBASIC2.65□□□□□ -1.99
USP46P62068 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
USP46P62068 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
USP46P62068 SNORA63.2-201ENST00000362603 126 ntBASIC2.64□□□□□ -1.99
USP46P62068 RNU6-161P-201ENST00000363051 106 ntBASIC2.64□□□□□ -1.99
USP46P62068 MT-TF-201ENST00000387314 71 ntBASIC2.64□□□□□ -1.99
USP46P62068 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USP46P62068 RNA5SP292-201ENST00000390974 118 ntBASIC2.64□□□□□ -1.99
USP46P62068 SNORD23.1-201ENST00000408212 104 ntBASIC2.64□□□□□ -1.99
USP46P62068 AC245517.4-201ENST00000448601 281 ntBASIC2.64□□□□□ -1.99
USP46P62068 RNU6-1108P-201ENST00000516308 104 ntBASIC2.64□□□□□ -1.99
USP46P62068 RNU6-531P-201ENST00000516694 104 ntBASIC2.64□□□□□ -1.99
USP46P62068 MIR3124-201ENST00000582636 67 ntBASIC2.64□□□□□ -1.99
USP46P62068 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USP46P62068 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP46P62068 SNORD36A-201ENST00000362874 73 ntBASIC2.63□□□□□ -1.99
USP46P62068 RNU6-53P-201ENST00000365367 106 ntBASIC2.63□□□□□ -1.99
USP46P62068 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
USP46P62068 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
USP46P62068 snoU13.25-201ENST00000458945 104 ntBASIC2.63□□□□□ -1.99
USP46P62068 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
USP46P62068 MIR6516-201ENST00000630554 81 ntBASIC2.63□□□□□ -1.99
USP46P62068 AC008163.1-202ENST00000636004 2889 ntBASIC2.63□□□□□ -1.99
USP46P62068 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USP46P62068 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP46P62068 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
USP46P62068 RNU6-686P-201ENST00000364839 107 ntBASIC2.62□□□□□ -1.99
USP46P62068 MT-TN-201ENST00000387400 73 ntBASIC2.62□□□□□ -1.99
USP46P62068 RNU6-466P-201ENST00000391224 103 ntBASIC2.62□□□□□ -1.99
USP46P62068 SNORD93-201ENST00000408813 74 ntBASIC2.62□□□□□ -1.99
USP46P62068 RPL30P7-201ENST00000479312 323 ntBASIC2.62□□□□□ -1.99
USP46P62068 SNORA18.5-201ENST00000516616 101 ntBASIC2.62□□□□□ -1.99
USP46P62068 SNORA25.16-201ENST00000516741 121 ntBASIC2.62□□□□□ -1.99
USP46P62068 AC015688.6-201ENST00000577737 104 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 377.7 ms