Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 Y_RNA.362-201ENST00000365518 110 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 RNU6-880P-201ENST00000384526 107 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 MIR548D2-201ENST00000384955 97 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 RNY4P18-201ENST00000391107 89 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 RNU4-69P-201ENST00000410677 143 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.16□□□□□ -2.22
SEC61A1P61619 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 Y_RNA.773-201ENST00000607168 90 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 AC087741.2-201ENST00000619415 172 ntBASIC1.16□□□□□ -2.22
SEC61A1P61619 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 SNORD115-2-201ENST00000362842 82 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 RNY4P6-201ENST00000363667 96 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 SNORD115-20-201ENST00000365099 82 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 MIR588-201ENST00000384900 83 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.15□□□□□ -2.23
SEC61A1P61619 RNU6-589P-201ENST00000516485 107 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 RNU6-919P-201ENST00000516731 104 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 Y_RNA.709-201ENST00000516952 92 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.15□□□□□ -2.23
SEC61A1P61619 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 uc_338.6-201ENST00000613544 171 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 MIR6740-201ENST00000618268 113 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 MIR1255B1-201ENST00000636325 63 ntBASIC1.15□□□□□ -2.23
SEC61A1P61619 RNU6-616P-201ENST00000384353 107 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 RNU6-910P-201ENST00000390844 107 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 RNU6-1086P-201ENST00000410930 100 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 MIR2115-201ENST00000516657 100 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.14□□□□□ -2.23
SEC61A1P61619 MIR4781-201ENST00000585250 76 ntBASIC1.14□□□□□ -2.23
SEC61A1P61619 AL589743.1-201ENST00000551932 2712 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 Y_RNA.299-201ENST00000364973 94 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 RNA5SP237-201ENST00000410414 113 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 AP000753.3-201ENST00000604083 169 ntBASIC1.13□□□□□ -2.23
SEC61A1P61619 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 SNORA2B-201ENST00000384583 137 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 AC063976.4-201ENST00000421971 163 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 RNU7-62P-201ENST00000458856 62 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 RNU1-123P-201ENST00000458950 160 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 snoU13.2-201ENST00000459201 104 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 snoU13.21-201ENST00000459368 105 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 RNU7-79P-201ENST00000516082 62 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 AC023827.1-201ENST00000569247 97 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 AC105081.1-201ENST00000617727 106 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
SEC61A1P61619 Y_RNA.81-201ENST00000362997 102 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 AC015818.7-201ENST00000428754 109 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 AC087499.7-201ENST00000441958 109 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 SNORD67.1-201ENST00000516618 108 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 RNU7-35P-201ENST00000517174 62 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 AC141846.1-201ENST00000568348 142 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 MIR4264-201ENST00000583520 66 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 uc_338.28-201ENST00000612082 187 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 AL662814.1-201ENST00000617364 121 ntBASIC1.11□□□□□ -2.23
SEC61A1P61619 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
SEC61A1P61619 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SEC61A1P61619 Y_RNA.85-201ENST00000363014 111 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 Y_RNA.281-201ENST00000364774 94 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 RNU6-1107P-201ENST00000364817 104 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 RNY1P13-201ENST00000365030 105 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 RNU6-1307P-201ENST00000391012 103 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 RNU6-613P-201ENST00000410412 108 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 SNORA7.5-201ENST00000410672 110 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
SEC61A1P61619 MIR4679-2-201ENST00000578358 77 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
SEC61A1P61619 SNORD115-19-201ENST00000363098 82 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 SNORD115-18-201ENST00000363293 82 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 SNORD115-17-201ENST00000364612 82 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RNU6-816P-201ENST00000390914 107 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RNU6-1268P-201ENST00000391214 107 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RNU6-1239P-201ENST00000391310 107 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RNU6-1165P-201ENST00000410119 107 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RPL39P25-201ENST00000449384 154 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 FAM71BP1-201ENST00000604431 523 ntBASIC1.09□□□□□ -2.23
SEC61A1P61619 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SEC61A1P61619 Y_RNA.116-201ENST00000363292 103 ntBASIC1.08□□□□□ -2.24
SEC61A1P61619 Y_RNA.155-201ENST00000363632 101 ntBASIC1.08□□□□□ -2.24
SEC61A1P61619 U8.6-201ENST00000364939 135 ntBASIC1.08□□□□□ -2.24
SEC61A1P61619 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
SEC61A1P61619 RPL39P34-201ENST00000477141 156 ntBASIC1.08□□□□□ -2.24
SEC61A1P61619 PDCD5P2-201ENST00000507570 312 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms