Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLRN1P58418 Y_RNA.155-201ENST00000363632 101 ntBASIC1.45□□□□□ -2.18
CLRN1P58418 MIR1302-5-201ENST00000408164 150 ntBASIC1.45□□□□□ -2.18
CLRN1P58418 AL031737.1-201ENST00000450125 223 ntBASIC1.45□□□□□ -2.18
CLRN1P58418 SNORD67.1-201ENST00000516618 108 ntBASIC1.45□□□□□ -2.18
CLRN1P58418 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
CLRN1P58418 RNY1P13-201ENST00000365030 105 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 RNU6-409P-201ENST00000384114 104 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 MIR563-201ENST00000385080 79 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 SNORA7.5-201ENST00000410672 110 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 RNU7-62P-201ENST00000458856 62 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 RNU6-521P-201ENST00000516663 105 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.44□□□□□ -2.18
CLRN1P58418 SEPT14P17-201ENST00000617978 177 ntBASIC1.44□□□□□ -2.18
CLRN1P58418 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLRN1P58418 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLRN1P58418 RNA5SP363-201ENST00000365072 115 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 Y_RNA.330-201ENST00000365230 109 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 MIR206-201ENST00000384872 86 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 RNU7-2P-201ENST00000516096 62 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 uc_338.6-201ENST00000613544 171 ntBASIC1.43□□□□□ -2.18
CLRN1P58418 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CLRN1P58418 MIR377-201ENST00000362145 69 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 SNORA51.5-201ENST00000384126 131 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 MIR605-201ENST00000385078 83 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU6-679P-201ENST00000391003 106 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 SNORA75.2-201ENST00000391138 150 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 SNORA75.3-201ENST00000391231 150 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU6-1165P-201ENST00000410119 107 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU6-733P-201ENST00000410759 104 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 AL353813.1-201ENST00000440700 253 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 RNU7-137P-201ENST00000516788 62 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 MIR3613-201ENST00000579844 87 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
CLRN1P58418 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
CLRN1P58418 MIR30D-201ENST00000362283 70 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNU6-580P-201ENST00000365159 107 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNU6-756P-201ENST00000383997 107 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNU6-1307P-201ENST00000391012 103 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNA5SP458-201ENST00000516188 119 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
CLRN1P58418 RNU6-766P-201ENST00000362478 107 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 SNORD114-10-201ENST00000363409 72 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 Y_RNA.328-201ENST00000365208 113 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 Y_RNA.360-201ENST00000365512 102 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 RNU6-949P-201ENST00000384040 107 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 SNORA2B-201ENST00000384583 137 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 RNU6-910P-201ENST00000390844 107 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 SNORA19.1-201ENST00000410656 129 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 AC141557.1-201ENST00000540982 400 ntBASIC1.4□□□□□ -2.19
CLRN1P58418 Y_RNA.168-201ENST00000363740 102 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 Y_RNA.448-201ENST00000384185 108 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 RNU6-1321P-201ENST00000390905 107 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.39□□□□□ -2.19
CLRN1P58418 RNU6-1099P-201ENST00000363533 107 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 RNU6-1113P-201ENST00000384348 107 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 MIR577-201ENST00000385196 96 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.38□□□□□ -2.19
CLRN1P58418 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
CLRN1P58418 MIR4694-201ENST00000578534 80 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 AL512310.12-203ENST00000640543 90 ntBASIC1.38□□□□□ -2.19
CLRN1P58418 RNY3P2-201ENST00000362918 102 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 SNORD113.3-201ENST00000364630 78 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU6-32P-201ENST00000383948 107 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU6-13P-201ENST00000384248 107 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 Y_RNA.495-201ENST00000384435 112 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 SNORA80D-201ENST00000384488 135 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU6-12P-201ENST00000384604 107 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU6-41P-201ENST00000384741 107 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 MIR590-201ENST00000385008 97 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 MIR764-201ENST00000390811 85 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 snoU13.21-201ENST00000459368 105 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU7-21P-201ENST00000459430 62 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 RNU6-1018P-201ENST00000516577 106 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 DEFB131E-201ENST00000532329 154 ntBASIC1.37□□□□□ -2.19
CLRN1P58418 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLRN1P58418 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLRN1P58418 RNU6-1313P-201ENST00000362622 102 ntBASIC1.36□□□□□ -2.19
CLRN1P58418 Y_RNA.78-201ENST00000362970 110 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms