Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU7-79P-201ENST00000516082 62 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 SCARNA15-202ENST00000516881 127 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 MIR4801-201ENST00000582704 82 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 AL365265.1-201ENST00000621045 234 ntBASIC-0.17□□□□□ -2.44
VSX2P58304 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 SNORA20-201ENST00000384662 132 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 RNU6-848P-201ENST00000515948 107 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 RNU6-617P-201ENST00000516147 107 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 RNU6-473P-201ENST00000516164 107 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 RNU6-135P-201ENST00000516769 101 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 MIR4680-201ENST00000580906 66 ntBASIC-0.18□□□□□ -2.44
VSX2P58304 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 RNU6-381P-201ENST00000391259 108 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 RNA5SP395-201ENST00000516567 118 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 AL365205.2-201ENST00000594586 68 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.19□□□□□ -2.44
VSX2P58304 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
VSX2P58304 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 SNORA70.25-201ENST00000612741 95 ntBASIC-0.2□□□□□ -2.44
VSX2P58304 RNA5SP133-201ENST00000363368 119 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 RNU6-726P-201ENST00000364680 107 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 RNU6-782P-201ENST00000516852 104 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 DEFB131E-201ENST00000532329 154 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 AC138869.1-201ENST00000568623 124 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 AL160413.1-201ENST00000622780 310 ntBASIC-0.21□□□□□ -2.44
VSX2P58304 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 SNORD115-24-201ENST00000363528 82 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 RNU6-978P-201ENST00000364371 103 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 RNU6-702P-201ENST00000364982 107 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.22□□□□□ -2.44
VSX2P58304 RNU6-728P-201ENST00000365375 104 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 RNU6-35P-201ENST00000384530 107 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 MIR501-201ENST00000390204 84 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 RNU7-70P-201ENST00000516941 66 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 RNU7-35P-201ENST00000517174 62 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 MIR4643-201ENST00000577473 78 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 MIR4282-201ENST00000583613 67 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 MIR3171-201ENST00000584270 74 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 AC134503.1-201ENST00000633048 54 ntBASIC-0.23□□□□□ -2.45
VSX2P58304 MIR1912-201ENST00000410389 80 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 RNU4-43P-201ENST00000410628 137 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 AC113618.1-201ENST00000416747 285 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 RNU7-161P-201ENST00000517289 62 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 AC020661.2-201ENST00000560114 134 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 AC138749.4-201ENST00000563970 127 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 AC006504.6-201ENST00000590142 199 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 U6.109-201ENST00000636749 87 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.24□□□□□ -2.45
VSX2P58304 RNU6-161P-201ENST00000363051 106 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 RNU4-58P-201ENST00000363192 141 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 RNU6-923P-201ENST00000364753 107 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 RNY3P16-201ENST00000516338 101 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 AL359881.1-201ENST00000602916 267 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
VSX2P58304 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 SNORA32-201ENST00000384072 121 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 MIR548P-201ENST00000408336 84 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 SNORA79-201ENST00000408376 140 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 AC022028.1-201ENST00000412054 408 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 AL121914.1-201ENST00000450188 156 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 SNORD116-25-201ENST00000516517 92 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 MIR378D2-201ENST00000580636 98 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 MIR3925-201ENST00000584674 77 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 U2.14-201ENST00000615943 113 ntBASIC-0.26□□□□□ -2.45
VSX2P58304 AL162376.1-201ENST00000624117 175 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms