Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 MIR181B2-201ENST00000385004 89 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 PMCHL1-202ENST00000423102 261 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 uc_338.10-201ENST00000621872 182 ntBASIC-1.13□□□□□ -2.59
CLDN12P56749 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 SNORD114-29-201ENST00000364819 70 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 MIR599-201ENST00000385069 95 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 MRPS35P2-201ENST00000508242 191 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 RNU6-699P-201ENST00000517081 110 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 uc_338.19-201ENST00000616808 99 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 AC002553.4-201ENST00000616896 331 ntBASIC-1.14□□□□□ -2.59
CLDN12P56749 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.15□□□□□ -2.59
CLDN12P56749 SNORD116.3-201ENST00000517176 78 ntBASIC-1.15□□□□□ -2.59
CLDN12P56749 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.15□□□□□ -2.59
CLDN12P56749 MIR3920-201ENST00000581751 86 ntBASIC-1.15□□□□□ -2.59
CLDN12P56749 AC006006.1-201ENST00000603082 144 ntBASIC-1.15□□□□□ -2.59
CLDN12P56749 RNU1-141P-201ENST00000364623 158 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 RNY1P2-201ENST00000364820 117 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
CLDN12P56749 MIR1277-201ENST00000408536 78 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 AC040926.1-201ENST00000530195 238 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
CLDN12P56749 AC069503.3-201ENST00000618674 145 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 MIR6738-201ENST00000619620 64 ntBASIC-1.16□□□□□ -2.6
CLDN12P56749 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 SNORD114-10-201ENST00000363409 72 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 MIR519A1-201ENST00000385257 85 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
CLDN12P56749 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLDN12P56749 RNU6-274P-201ENST00000459566 107 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 RNU6-570P-201ENST00000517051 105 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLDN12P56749 AC103591.3-201ENST00000608684 209 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.17□□□□□ -2.6
CLDN12P56749 RNU4-90P-201ENST00000362773 141 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 RNU6-901P-201ENST00000384593 106 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 MIR9-2-201ENST00000384838 87 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 AL731563.1-201ENST00000442202 214 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 AL500527.2-201ENST00000454105 95 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 RNU7-13P-201ENST00000516413 62 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 RNU7-137P-201ENST00000516788 62 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 MIR4324-201ENST00000584846 72 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 AL365205.2-201ENST00000594586 68 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 RNU6-86P-201ENST00000606534 107 ntBASIC-1.18□□□□□ -2.6
CLDN12P56749 SNORD115-2-201ENST00000362842 82 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 SNORD115-20-201ENST00000365099 82 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 MIR587-201ENST00000384845 96 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 SNORA53-201ENST00000391141 249 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 SNORA13-201ENST00000458790 133 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 MTND4P17-201ENST00000470444 350 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 RNU6-507P-201ENST00000516045 100 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
CLDN12P56749 MIR3129-201ENST00000581095 76 ntBASIC-1.19□□□□□ -2.6
CLDN12P56749 MIR409-201ENST00000362237 79 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 SNORD113-8-201ENST00000363497 74 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 RNU1-115P-201ENST00000365329 160 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 SNORD56B-201ENST00000384713 71 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 SNRPGP8-201ENST00000454064 226 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 SNORD38.3-201ENST00000516599 73 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 SNORA20.3-201ENST00000516880 132 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 MTND5P40-201ENST00000559945 246 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 MIR4499-201ENST00000584834 69 ntBASIC-1.2□□□□□ -2.6
CLDN12P56749 RNU6-10P-201ENST00000384036 107 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 MIR548I2-201ENST00000408348 149 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 HSPE1P25-201ENST00000455484 251 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 TRAJ51-201ENST00000504127 63 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 RNU6-175P-201ENST00000516896 107 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 MIR4280-201ENST00000582178 76 ntBASIC-1.21□□□□□ -2.6
CLDN12P56749 RNU6-845P-201ENST00000362578 103 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 RNU6-358P-201ENST00000516564 75 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 RNY1P9-201ENST00000532431 109 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 AP000676.1-201ENST00000533307 52 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 AL606534.2-204ENST00000635008 178 ntBASIC-1.22□□□□□ -2.6
CLDN12P56749 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.23□□□□□ -2.61
CLDN12P56749 RNU6-721P-201ENST00000410155 105 ntBASIC-1.23□□□□□ -2.61
CLDN12P56749 SNORD57-201ENST00000448188 72 ntBASIC-1.23□□□□□ -2.61
CLDN12P56749 AC113139.1-201ENST00000605049 239 ntBASIC-1.23□□□□□ -2.61
CLDN12P56749 MIR6851-201ENST00000617060 67 ntBASIC-1.23□□□□□ -2.61
CLDN12P56749 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms