Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MT-TF-201ENST00000387314 71 ntBASIC0.79□□□□□ -2.28
CDH11P55287 SNORD89-201ENST00000390981 114 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6-994P-201ENST00000410507 111 ntBASIC0.79□□□□□ -2.28
CDH11P55287 AC096949.1-201ENST00000412047 152 ntBASIC0.79□□□□□ -2.28
CDH11P55287 AC015818.7-201ENST00000428754 109 ntBASIC0.79□□□□□ -2.28
CDH11P55287 AC087499.7-201ENST00000441958 109 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6-893P-201ENST00000458841 100 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6-240P-201ENST00000516098 97 ntBASIC0.79□□□□□ -2.28
CDH11P55287 Y_RNA.690-201ENST00000516603 95 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6-1223P-201ENST00000517124 104 ntBASIC0.79□□□□□ -2.28
CDH11P55287 AP001340.1-201ENST00000624405 217 ntBASIC0.79□□□□□ -2.28
CDH11P55287 RNU6-690P-201ENST00000365242 106 ntBASIC0.78□□□□□ -2.28
CDH11P55287 RNU6-342P-201ENST00000384521 104 ntBASIC0.78□□□□□ -2.28
CDH11P55287 AC113410.1-201ENST00000505029 247 ntBASIC0.78□□□□□ -2.28
CDH11P55287 MIR4305-201ENST00000583252 102 ntBASIC0.78□□□□□ -2.28
CDH11P55287 AC108081.1-201ENST00000604358 221 ntBASIC0.78□□□□□ -2.28
CDH11P55287 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.78□□□□□ -2.28
CDH11P55287 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.78□□□□□ -2.28
CDH11P55287 MIR1-1-201ENST00000362147 71 ntBASIC0.77□□□□□ -2.29
CDH11P55287 Y_RNA.280-201ENST00000364765 112 ntBASIC0.77□□□□□ -2.29
CDH11P55287 RNU6-915P-201ENST00000364943 103 ntBASIC0.77□□□□□ -2.29
CDH11P55287 SNORD18B-201ENST00000365659 72 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR513C-201ENST00000401352 84 ntBASIC0.77□□□□□ -2.29
CDH11P55287 AL512326.2-201ENST00000426359 151 ntBASIC0.77□□□□□ -2.29
CDH11P55287 AC067940.1-201ENST00000458411 300 ntBASIC0.77□□□□□ -2.29
CDH11P55287 SNORA25.12-201ENST00000516202 82 ntBASIC0.77□□□□□ -2.29
CDH11P55287 AC141846.1-201ENST00000568348 142 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR4771-2-201ENST00000577758 74 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
CDH11P55287 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR4771-1-201ENST00000582617 74 ntBASIC0.77□□□□□ -2.29
CDH11P55287 MIR4676-201ENST00000583078 72 ntBASIC0.77□□□□□ -2.29
CDH11P55287 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
CDH11P55287 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
CDH11P55287 Y_RNA.366-201ENST00000365540 102 ntBASIC0.76□□□□□ -2.29
CDH11P55287 RNY1P5-201ENST00000383890 115 ntBASIC0.76□□□□□ -2.29
CDH11P55287 RNU6-209P-201ENST00000384118 107 ntBASIC0.76□□□□□ -2.29
CDH11P55287 SNORA18-201ENST00000384416 132 ntBASIC0.76□□□□□ -2.29
CDH11P55287 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
CDH11P55287 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
CDH11P55287 AL022718.1-201ENST00000412004 84 ntBASIC0.76□□□□□ -2.29
CDH11P55287 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
CDH11P55287 RNU7-185P-201ENST00000459215 60 ntBASIC0.76□□□□□ -2.29
CDH11P55287 RNU7-35P-201ENST00000517174 62 ntBASIC0.76□□□□□ -2.29
CDH11P55287 AC004812.1-201ENST00000540773 146 ntBASIC0.76□□□□□ -2.29
CDH11P55287 MIR4804-201ENST00000581683 73 ntBASIC0.76□□□□□ -2.29
CDH11P55287 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
CDH11P55287 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
CDH11P55287 Y_RNA.420-201ENST00000384043 110 ntBASIC0.75□□□□□ -2.29
CDH11P55287 Y_RNA.531-201ENST00000384589 121 ntBASIC0.75□□□□□ -2.29
CDH11P55287 RNU6-1237P-201ENST00000384777 107 ntBASIC0.75□□□□□ -2.29
CDH11P55287 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
CDH11P55287 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
CDH11P55287 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.75□□□□□ -2.29
CDH11P55287 RNU6-1086P-201ENST00000410930 100 ntBASIC0.75□□□□□ -2.29
CDH11P55287 MIR1270-201ENST00000459320 83 ntBASIC0.75□□□□□ -2.29
CDH11P55287 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
CDH11P55287 IGKV1-22-201ENST00000524313 326 ntBASIC0.75□□□□□ -2.29
CDH11P55287 AC133485.4-201ENST00000561835 220 ntBASIC0.75□□□□□ -2.29
CDH11P55287 AC138907.4-201ENST00000570107 226 ntBASIC0.75□□□□□ -2.29
CDH11P55287 AL136317.1-201ENST00000612653 226 ntBASIC0.75□□□□□ -2.29
CDH11P55287 AC022709.1-201ENST00000615967 87 ntBASIC0.75□□□□□ -2.29
CDH11P55287 RNY1P13-201ENST00000365030 105 ntBASIC0.74□□□□□ -2.29
CDH11P55287 RNU6-949P-201ENST00000384040 107 ntBASIC0.74□□□□□ -2.29
CDH11P55287 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
CDH11P55287 MIR125B2-201ENST00000385128 89 ntBASIC0.74□□□□□ -2.29
CDH11P55287 U8.15-201ENST00000390947 134 ntBASIC0.74□□□□□ -2.29
CDH11P55287 RNU7-113P-201ENST00000459273 62 ntBASIC0.74□□□□□ -2.29
CDH11P55287 RNU7-123P-201ENST00000515911 60 ntBASIC0.74□□□□□ -2.29
CDH11P55287 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
CDH11P55287 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CDH11P55287 AC021443.1-201ENST00000604478 211 ntBASIC0.74□□□□□ -2.29
CDH11P55287 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
CDH11P55287 Y_RNA.298-201ENST00000364960 107 ntBASIC0.73□□□□□ -2.29
CDH11P55287 Y_RNA.488-201ENST00000384403 102 ntBASIC0.73□□□□□ -2.29
CDH11P55287 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
CDH11P55287 RNA5SP237-201ENST00000410414 113 ntBASIC0.73□□□□□ -2.29
CDH11P55287 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
CDH11P55287 RNA5SP272-201ENST00000516095 111 ntBASIC0.73□□□□□ -2.29
CDH11P55287 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
CDH11P55287 RNU6-426P-201ENST00000516464 97 ntBASIC0.73□□□□□ -2.29
CDH11P55287 Y_RNA.692-201ENST00000516627 105 ntBASIC0.73□□□□□ -2.29
CDH11P55287 AP001328.1-201ENST00000528550 176 ntBASIC0.73□□□□□ -2.29
CDH11P55287 SNORD92-201ENST00000585078 85 ntBASIC0.73□□□□□ -2.29
CDH11P55287 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
CDH11P55287 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CDH11P55287 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
CDH11P55287 RNU7-164P-201ENST00000459221 62 ntBASIC0.72□□□□□ -2.29
CDH11P55287 RNU6-346P-201ENST00000516288 111 ntBASIC0.72□□□□□ -2.29
CDH11P55287 RNA5SP33-201ENST00000516687 98 ntBASIC0.72□□□□□ -2.29
CDH11P55287 MIR548AE2-201ENST00000583456 67 ntBASIC0.72□□□□□ -2.29
CDH11P55287 AL137067.1-201ENST00000615933 120 ntBASIC0.72□□□□□ -2.29
CDH11P55287 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CDH11P55287 Y_RNA.114-201ENST00000363265 113 ntBASIC0.71□□□□□ -2.3
CDH11P55287 Y_RNA.294-201ENST00000364916 102 ntBASIC0.71□□□□□ -2.3
CDH11P55287 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CDH11P55287 Y_RNA.568-201ENST00000384742 113 ntBASIC0.71□□□□□ -2.3
CDH11P55287 MIR520F-201ENST00000384824 87 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms