Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 RNA5SP144-201ENST00000410846 116 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 AC113410.1-201ENST00000505029 247 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 RNU7-200P-201ENST00000516105 62 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 Y_RNA.757-201ENST00000578934 114 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 Y_RNA.171-201ENST00000363760 102 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 RNU6-915P-201ENST00000364943 103 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 MIR569-201ENST00000385228 96 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 RNA5SP237-201ENST00000410414 113 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 RNU6-1258P-201ENST00000516911 111 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 AC133485.4-201ENST00000561835 220 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 AC138907.4-201ENST00000570107 226 ntBASIC0.94□□□□□ -2.26
NR1H2P55055 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 Y_RNA.488-201ENST00000384403 102 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 MIR563-201ENST00000385080 79 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 AL022718.1-201ENST00000412004 84 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 RPS26P5-201ENST00000418544 335 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 RNA5SP272-201ENST00000516095 111 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 MIR4771-2-201ENST00000577758 74 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 MIR4771-1-201ENST00000582617 74 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 MIR4305-201ENST00000583252 102 ntBASIC0.93□□□□□ -2.26
NR1H2P55055 Y_RNA.205-201ENST00000364128 113 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 Y_RNA.420-201ENST00000384043 110 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 RNU6-342P-201ENST00000384521 104 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 MIR1827-201ENST00000408549 66 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 MIR18B-201ENST00000454574 71 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 RNU7-113P-201ENST00000459273 62 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 AP001328.1-201ENST00000528550 176 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 AC021443.1-201ENST00000604478 211 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.92□□□□□ -2.26
NR1H2P55055 MIR30D-201ENST00000362283 70 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 SNORA18-201ENST00000384416 132 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 AL512326.2-201ENST00000426359 151 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 RNU2-35P-201ENST00000516446 142 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 Y_RNA.692-201ENST00000516627 105 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 AL662814.1-201ENST00000617364 121 ntBASIC0.91□□□□□ -2.26
NR1H2P55055 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
NR1H2P55055 RNU6-369P-201ENST00000362515 102 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 Y_RNA.366-201ENST00000365540 102 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 RNU7-164P-201ENST00000459221 62 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 RNU6-346P-201ENST00000516288 111 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 RNU6-426P-201ENST00000516464 97 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 MIR3121-201ENST00000579680 77 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 AC108081.1-201ENST00000604358 221 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 AP001340.1-201ENST00000624405 217 ntBASIC0.9□□□□□ -2.27
NR1H2P55055 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.9□□□□□ -2.27
NR1H2P55055 AC023934.1-201ENST00000574529 2389 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 Y_RNA.470-201ENST00000384307 117 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 Y_RNA.506-201ENST00000384494 102 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 MT-TF-201ENST00000387314 71 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 RNA5SP33-201ENST00000516687 98 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 AC004812.1-201ENST00000540773 146 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 AC020891.4-201ENST00000605745 93 ntBASIC0.89□□□□□ -2.27
NR1H2P55055 Y_RNA.531-201ENST00000384589 121 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 RPL39P25-201ENST00000449384 154 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 RNU7-185P-201ENST00000459215 60 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 AC141846.1-201ENST00000568348 142 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 MIR4676-201ENST00000583078 72 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 AL137067.1-201ENST00000615933 120 ntBASIC0.88□□□□□ -2.27
NR1H2P55055 Y_RNA.294-201ENST00000364916 102 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 Y_RNA.343-201ENST00000365354 112 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NR1H2P55055 RNY1P5-201ENST00000383890 115 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.87□□□□□ -2.27
NR1H2P55055 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 RNU7-123P-201ENST00000515911 60 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.87□□□□□ -2.27
NR1H2P55055 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 SNORD115-2-201ENST00000362842 82 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 Y_RNA.114-201ENST00000363265 113 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 Y_RNA.298-201ENST00000364960 107 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 SNORD115-20-201ENST00000365099 82 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
NR1H2P55055 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NR1H2P55055 SNORA32-201ENST00000384072 121 ntBASIC0.85□□□□□ -2.27
NR1H2P55055 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
NR1H2P55055 SNORD105-201ENST00000386910 85 ntBASIC0.85□□□□□ -2.27
NR1H2P55055 SNORD93-201ENST00000408813 74 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms