Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
TTC3P53804 RNU6-168P-201ENST00000516189 101 ntBASIC1.41□□□□□ -2.18
TTC3P53804 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TTC3P53804 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
TTC3P53804 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TTC3P53804 Y_RNA.328-201ENST00000365208 113 ntBASIC1.4□□□□□ -2.18
TTC3P53804 SNORA19.1-201ENST00000410656 129 ntBASIC1.4□□□□□ -2.18
TTC3P53804 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.18
TTC3P53804 DEFB131E-201ENST00000532329 154 ntBASIC1.4□□□□□ -2.18
TTC3P53804 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
TTC3P53804 RNU6-766P-201ENST00000362478 107 ntBASIC1.4□□□□□ -2.19
TTC3P53804 RNU6-1255P-201ENST00000363434 112 ntBASIC1.4□□□□□ -2.19
TTC3P53804 SNORA51.10-201ENST00000384418 136 ntBASIC1.4□□□□□ -2.19
TTC3P53804 RNA5SP57-201ENST00000459463 123 ntBASIC1.4□□□□□ -2.19
TTC3P53804 SNORD123-201ENST00000459473 70 ntBASIC1.4□□□□□ -2.19
TTC3P53804 RNU7-41P-201ENST00000515917 61 ntBASIC1.4□□□□□ -2.19
TTC3P53804 Y_RNA.773-201ENST00000607168 90 ntBASIC1.4□□□□□ -2.19
TTC3P53804 AL035470.1-201ENST00000622571 220 ntBASIC1.4□□□□□ -2.19
TTC3P53804 Z97988.1-201ENST00000637697 135 ntBASIC1.4□□□□□ -2.19
TTC3P53804 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TTC3P53804 Y_RNA.171-201ENST00000363760 102 ntBASIC1.39□□□□□ -2.19
TTC3P53804 RNU6-396P-201ENST00000365369 105 ntBASIC1.39□□□□□ -2.19
TTC3P53804 Y_RNA.466-201ENST00000384294 113 ntBASIC1.39□□□□□ -2.19
TTC3P53804 RNU4-69P-201ENST00000410677 143 ntBASIC1.39□□□□□ -2.19
TTC3P53804 RNU6-1054P-201ENST00000411293 104 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AC244636.1-201ENST00000421152 228 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AC245517.4-201ENST00000448601 281 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.39□□□□□ -2.19
TTC3P53804 RNU7-45P-201ENST00000459460 63 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AC068339.1-201ENST00000526965 141 ntBASIC1.39□□□□□ -2.19
TTC3P53804 MIR6717-201ENST00000622747 73 ntBASIC1.39□□□□□ -2.19
TTC3P53804 Y_RNA.155-201ENST00000363632 101 ntBASIC1.39□□□□□ -2.19
TTC3P53804 SNORD115-35-201ENST00000365122 82 ntBASIC1.39□□□□□ -2.19
TTC3P53804 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
TTC3P53804 RNU6-733P-201ENST00000410759 104 ntBASIC1.39□□□□□ -2.19
TTC3P53804 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
TTC3P53804 AL442128.1-201ENST00000615151 90 ntBASIC1.39□□□□□ -2.19
TTC3P53804 MIR4251-201ENST00000635819 61 ntBASIC1.39□□□□□ -2.19
TTC3P53804 Y_RNA.78-201ENST00000362970 110 ntBASIC1.38□□□□□ -2.19
TTC3P53804 RNU6-1237P-201ENST00000384777 107 ntBASIC1.38□□□□□ -2.19
TTC3P53804 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TTC3P53804 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
TTC3P53804 snoU13.25-201ENST00000458945 104 ntBASIC1.38□□□□□ -2.19
TTC3P53804 MIR3122-201ENST00000577243 73 ntBASIC1.38□□□□□ -2.19
TTC3P53804 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TTC3P53804 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
TTC3P53804 RNU1-93P-201ENST00000364704 169 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNA5SP259-201ENST00000365541 109 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-32P-201ENST00000383948 107 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-13P-201ENST00000384248 107 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-12P-201ENST00000384604 107 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-41P-201ENST00000384741 107 ntBASIC1.37□□□□□ -2.19
TTC3P53804 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
TTC3P53804 MIR1302-7-201ENST00000408841 72 ntBASIC1.37□□□□□ -2.19
TTC3P53804 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU7-61P-201ENST00000515897 61 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
TTC3P53804 MIR5582-201ENST00000579697 68 ntBASIC1.37□□□□□ -2.19
TTC3P53804 AL662814.1-201ENST00000617364 121 ntBASIC1.37□□□□□ -2.19
TTC3P53804 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TTC3P53804 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-1131P-201ENST00000364955 107 ntBASIC1.37□□□□□ -2.19
TTC3P53804 Y_RNA.323-201ENST00000365157 109 ntBASIC1.37□□□□□ -2.19
TTC3P53804 RNU6-913P-201ENST00000390913 95 ntBASIC1.37□□□□□ -2.19
TTC3P53804 HMGN1P33-201ENST00000432945 451 ntBASIC1.37□□□□□ -2.19
TTC3P53804 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
TTC3P53804 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
TTC3P53804 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
TTC3P53804 SNORA16B-201ENST00000364674 135 ntBASIC1.36□□□□□ -2.19
TTC3P53804 Y_RNA.495-201ENST00000384435 112 ntBASIC1.36□□□□□ -2.19
TTC3P53804 MT-TN-201ENST00000387400 73 ntBASIC1.36□□□□□ -2.19
TTC3P53804 Y_RNA.601-201ENST00000410500 113 ntBASIC1.36□□□□□ -2.19
TTC3P53804 AC244023.1-201ENST00000426884 112 ntBASIC1.36□□□□□ -2.19
TTC3P53804 MIR3192-201ENST00000584920 77 ntBASIC1.36□□□□□ -2.19
TTC3P53804 AC242498.1-201ENST00000604134 111 ntBASIC1.36□□□□□ -2.19
TTC3P53804 MIR6078-201ENST00000611069 100 ntBASIC1.36□□□□□ -2.19
TTC3P53804 RNU6-409P-201ENST00000384114 104 ntBASIC1.35□□□□□ -2.19
TTC3P53804 U8.15-201ENST00000390947 134 ntBASIC1.35□□□□□ -2.19
TTC3P53804 MTATP8P2-201ENST00000435212 202 ntBASIC1.35□□□□□ -2.19
TTC3P53804 SNORD67.1-201ENST00000516618 108 ntBASIC1.35□□□□□ -2.19
TTC3P53804 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
TTC3P53804 RNY3P2-201ENST00000362918 102 ntBASIC1.35□□□□□ -2.19
TTC3P53804 SNORD114-10-201ENST00000363409 72 ntBASIC1.35□□□□□ -2.19
TTC3P53804 RNU6-1014P-201ENST00000383940 103 ntBASIC1.35□□□□□ -2.19
TTC3P53804 SNORA18-201ENST00000384416 132 ntBASIC1.35□□□□□ -2.19
TTC3P53804 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
TTC3P53804 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
TTC3P53804 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
TTC3P53804 RNU6-949P-201ENST00000384040 107 ntBASIC1.34□□□□□ -2.19
TTC3P53804 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
TTC3P53804 RNU7-6P-201ENST00000516845 62 ntBASIC1.34□□□□□ -2.19
TTC3P53804 RNA5SP170-201ENST00000517150 101 ntBASIC1.34□□□□□ -2.19
TTC3P53804 MIR548AO-201ENST00000579992 96 ntBASIC1.34□□□□□ -2.19
TTC3P53804 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
TTC3P53804 RNU6-1113P-201ENST00000384348 107 ntBASIC1.33□□□□□ -2.2
TTC3P53804 MIR513A1-201ENST00000385138 129 ntBASIC1.33□□□□□ -2.2
TTC3P53804 RNU6-1190P-201ENST00000410811 104 ntBASIC1.33□□□□□ -2.2
TTC3P53804 Y_RNA.649-201ENST00000459077 103 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 275.9 ms