Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4473-201ENST00000583731 91 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 MIR6854-201ENST00000614935 69 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 AC090582.1-201ENST00000636321 199 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 RPS29P25-201ENST00000481709 171 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.23□□□□□ -2.61
NUP98P52948 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 SNORD2-201ENST00000459163 69 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 YWHAEP2-201ENST00000580066 112 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 AC011603.4-201ENST00000611325 277 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 AC007485.1-201ENST00000616755 206 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 RNU6-780P-201ENST00000391030 104 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 AF228730.3-201ENST00000436691 102 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 MTND5P5-201ENST00000503764 376 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 RNU6-397P-201ENST00000516226 104 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 RNU7-110P-201ENST00000516891 62 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.24□□□□□ -2.61
NUP98P52948 MIR6129-201ENST00000616087 109 ntBASIC-1.24□□□□□ -2.61
NUP98P52948 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 MIR599-201ENST00000385069 95 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 RNY4P36-201ENST00000391116 96 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 SNORD18.2-201ENST00000459604 70 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 RNU6-764P-201ENST00000516396 105 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 RNU7-70P-201ENST00000516941 66 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 MIR5688-201ENST00000580619 83 ntBASIC-1.25□□□□□ -2.61
NUP98P52948 SNORD114-10-201ENST00000363409 72 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 DEFB108C-201ENST00000400154 252 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.26□□□□□ -2.61
NUP98P52948 Z99129.1-201ENST00000612510 255 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 SNORD24-201ENST00000383884 75 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 snoU83B.1-201ENST00000517136 88 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 U6.92-201ENST00000636464 89 ntBASIC-1.26□□□□□ -2.61
NUP98P52948 RNU6-226P-201ENST00000363778 107 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 AC097635.1-201ENST00000450678 155 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 RNU7-13P-201ENST00000516413 62 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.27□□□□□ -2.61
NUP98P52948 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 AC093423.1-201ENST00000440817 142 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 U2.1-201ENST00000618978 145 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 AC021613.1-201ENST00000623880 111 ntBASIC-1.28□□□□□ -2.61
NUP98P52948 SNORA22.1-201ENST00000362701 134 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-484P-201ENST00000384016 107 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-905P-201ENST00000384434 107 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-370P-201ENST00000411008 104 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 SERF1AP1-201ENST00000514575 187 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 DEFB117-201ENST00000602356 141 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 MIR8068-201ENST00000618032 68 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 MIR539-201ENST00000365690 78 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-831P-201ENST00000384548 107 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 RNU6-21P-201ENST00000384710 107 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 MTND1P34-201ENST00000438556 671 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 AC107399.1-201ENST00000451226 265 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.29□□□□□ -2.62
NUP98P52948 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 RNY1P2-201ENST00000364820 117 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 MIR8485-201ENST00000401372 91 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 PMCHL1-202ENST00000423102 261 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
NUP98P52948 MTND5P40-201ENST00000559945 246 ntBASIC-1.3□□□□□ -2.62
NUP98P52948 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 MIR628-201ENST00000385229 95 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.31□□□□□ -2.62
NUP98P52948 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.31□□□□□ -2.62
NUP98P52948 MTND1P1-201ENST00000445453 368 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 RNU7-55P-201ENST00000459426 62 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 SEPT14P8-201ENST00000508026 178 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 MIR147A-201ENST00000385079 72 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 MIR527-201ENST00000385244 85 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 RNU6-763P-201ENST00000390865 106 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 SNORD67.1-201ENST00000516618 108 ntBASIC-1.31□□□□□ -2.62
NUP98P52948 SNORD113-5-201ENST00000607261 78 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms