Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 Y_RNA.588-201ENST00000391254 102 ntBASIC0.52□□□□□ -2.33
CCR9P51686 RNU7-113P-201ENST00000459273 62 ntBASIC0.52□□□□□ -2.33
CCR9P51686 MIR6082-201ENST00000613604 109 ntBASIC0.52□□□□□ -2.33
CCR9P51686 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.52□□□□□ -2.33
CCR9P51686 AC078938.1-201ENST00000620993 318 ntBASIC0.52□□□□□ -2.33
CCR9P51686 uc_338.16-201ENST00000621804 95 ntBASIC0.52□□□□□ -2.33
CCR9P51686 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CCR9P51686 RNU4-84P-201ENST00000364200 139 ntBASIC0.51□□□□□ -2.33
CCR9P51686 RNU6-200P-201ENST00000364743 107 ntBASIC0.51□□□□□ -2.33
CCR9P51686 RNY1P13-201ENST00000365030 105 ntBASIC0.51□□□□□ -2.33
CCR9P51686 RNU6-1318P-201ENST00000365389 103 ntBASIC0.51□□□□□ -2.33
CCR9P51686 Y_RNA.497-201ENST00000384447 98 ntBASIC0.51□□□□□ -2.33
CCR9P51686 AC133485.1-201ENST00000567176 124 ntBASIC0.51□□□□□ -2.33
CCR9P51686 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
CCR9P51686 MIR4491-201ENST00000581087 68 ntBASIC0.51□□□□□ -2.33
CCR9P51686 Y_RNA.240-201ENST00000364469 95 ntBASIC0.5□□□□□ -2.33
CCR9P51686 RNU1-93P-201ENST00000364704 169 ntBASIC0.5□□□□□ -2.33
CCR9P51686 RNU6-679P-201ENST00000391003 106 ntBASIC0.5□□□□□ -2.33
CCR9P51686 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.5□□□□□ -2.33
CCR9P51686 Y_RNA.700-201ENST00000516806 100 ntBASIC0.5□□□□□ -2.33
CCR9P51686 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCR9P51686 SNORD115-2-201ENST00000362842 82 ntBASIC0.49□□□□□ -2.33
CCR9P51686 SNORD115-20-201ENST00000365099 82 ntBASIC0.49□□□□□ -2.33
CCR9P51686 SNORA72.6-201ENST00000384520 129 ntBASIC0.49□□□□□ -2.33
CCR9P51686 SNORD37.2-201ENST00000391075 66 ntBASIC0.49□□□□□ -2.33
CCR9P51686 AC096949.1-201ENST00000412047 152 ntBASIC0.49□□□□□ -2.33
CCR9P51686 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU7-79P-201ENST00000516082 62 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU6-469P-201ENST00000516253 101 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU7-121P-201ENST00000516604 62 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU6-388P-201ENST00000517012 105 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU6-389P-201ENST00000517048 105 ntBASIC0.49□□□□□ -2.33
CCR9P51686 AC004812.1-201ENST00000540773 146 ntBASIC0.49□□□□□ -2.33
CCR9P51686 DNAJC19P2-201ENST00000593340 302 ntBASIC0.49□□□□□ -2.33
CCR9P51686 RNU6-588P-201ENST00000410281 105 ntBASIC0.48□□□□□ -2.33
CCR9P51686 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.33
CCR9P51686 RNU7-120P-201ENST00000459334 63 ntBASIC0.48□□□□□ -2.33
CCR9P51686 RNA5SP33-201ENST00000516687 98 ntBASIC0.48□□□□□ -2.33
CCR9P51686 RNU7-35P-201ENST00000517174 62 ntBASIC0.48□□□□□ -2.33
CCR9P51686 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
CCR9P51686 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
CCR9P51686 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.48□□□□□ -2.33
CCR9P51686 Y_RNA.120-201ENST00000363304 110 ntBASIC0.47□□□□□ -2.33
CCR9P51686 Y_RNA.470-201ENST00000384307 117 ntBASIC0.47□□□□□ -2.33
CCR9P51686 snosnR66.1-201ENST00000391095 99 ntBASIC0.47□□□□□ -2.33
CCR9P51686 Y_RNA.617-201ENST00000410920 90 ntBASIC0.47□□□□□ -2.33
CCR9P51686 RNU6-138P-201ENST00000515952 107 ntBASIC0.47□□□□□ -2.33
CCR9P51686 MIR4305-201ENST00000583252 102 ntBASIC0.47□□□□□ -2.33
CCR9P51686 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCR9P51686 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CCR9P51686 Y_RNA.174-201ENST00000363781 105 ntBASIC0.46□□□□□ -2.34
CCR9P51686 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
CCR9P51686 SNORD18B-201ENST00000365659 72 ntBASIC0.46□□□□□ -2.34
CCR9P51686 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
CCR9P51686 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
CCR9P51686 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
CCR9P51686 Y_RNA.662-201ENST00000516028 97 ntBASIC0.46□□□□□ -2.34
CCR9P51686 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.46□□□□□ -2.34
CCR9P51686 Y_RNA.29-201ENST00000362570 113 ntBASIC0.45□□□□□ -2.34
CCR9P51686 Y_RNA.584-201ENST00000391090 114 ntBASIC0.45□□□□□ -2.34
CCR9P51686 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
CCR9P51686 RNU6-1135P-201ENST00000411083 103 ntBASIC0.45□□□□□ -2.34
CCR9P51686 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
CCR9P51686 AC133485.4-201ENST00000561835 220 ntBASIC0.45□□□□□ -2.34
CCR9P51686 AC138907.4-201ENST00000570107 226 ntBASIC0.45□□□□□ -2.34
CCR9P51686 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
CCR9P51686 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
CCR9P51686 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
CCR9P51686 RNA5SP432-201ENST00000362480 116 ntBASIC0.44□□□□□ -2.34
CCR9P51686 Y_RNA.441-201ENST00000384123 112 ntBASIC0.44□□□□□ -2.34
CCR9P51686 Y_RNA.531-201ENST00000384589 121 ntBASIC0.44□□□□□ -2.34
CCR9P51686 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
CCR9P51686 MIR1276-201ENST00000408707 83 ntBASIC0.44□□□□□ -2.34
CCR9P51686 RNU6-240P-201ENST00000516098 97 ntBASIC0.44□□□□□ -2.34
CCR9P51686 RNU6-861P-201ENST00000516745 106 ntBASIC0.44□□□□□ -2.34
CCR9P51686 RNU6-135P-201ENST00000516769 101 ntBASIC0.44□□□□□ -2.34
CCR9P51686 RNU2-60P-201ENST00000517290 128 ntBASIC0.44□□□□□ -2.34
CCR9P51686 AC021443.1-201ENST00000604478 211 ntBASIC0.44□□□□□ -2.34
CCR9P51686 MIR3658-201ENST00000636291 56 ntBASIC0.44□□□□□ -2.34
CCR9P51686 SNORA32-201ENST00000384072 121 ntBASIC0.43□□□□□ -2.34
CCR9P51686 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
CCR9P51686 AL512326.2-201ENST00000426359 151 ntBASIC0.43□□□□□ -2.34
CCR9P51686 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
CCR9P51686 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.43□□□□□ -2.34
CCR9P51686 RNU6-682P-201ENST00000363843 106 ntBASIC0.42□□□□□ -2.34
CCR9P51686 Y_RNA.191-201ENST00000363972 113 ntBASIC0.42□□□□□ -2.34
CCR9P51686 SNORD114-22-201ENST00000365423 72 ntBASIC0.42□□□□□ -2.34
CCR9P51686 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
CCR9P51686 Y_RNA.536-201ENST00000384621 113 ntBASIC0.42□□□□□ -2.34
CCR9P51686 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CCR9P51686 RPS29P1-201ENST00000465274 159 ntBASIC0.42□□□□□ -2.34
CCR9P51686 RNU2-35P-201ENST00000516446 142 ntBASIC0.42□□□□□ -2.34
CCR9P51686 SNORA25.16-201ENST00000516741 121 ntBASIC0.42□□□□□ -2.34
CCR9P51686 Y_RNA.697-201ENST00000516776 113 ntBASIC0.42□□□□□ -2.34
CCR9P51686 SNORA81.3-201ENST00000517283 198 ntBASIC0.42□□□□□ -2.34
CCR9P51686 DEFB131E-201ENST00000532329 154 ntBASIC0.42□□□□□ -2.34
CCR9P51686 MIR548AE2-201ENST00000583456 67 ntBASIC0.42□□□□□ -2.34
CCR9P51686 MIR6504-201ENST00000613520 61 ntBASIC0.42□□□□□ -2.34
CCR9P51686 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms