Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 PVT1_3.1-201ENST00000620853 95 ntBASIC0.45□□□□□ -2.34
LIG4P49917 Y_RNA.42-201ENST00000362660 108 ntBASIC0.44□□□□□ -2.34
LIG4P49917 RNU6-47P-201ENST00000383866 107 ntBASIC0.44□□□□□ -2.34
LIG4P49917 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
LIG4P49917 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
LIG4P49917 RNA5SP480-201ENST00000516840 109 ntBASIC0.44□□□□□ -2.34
LIG4P49917 RNU6-1258P-201ENST00000516911 111 ntBASIC0.44□□□□□ -2.34
LIG4P49917 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
LIG4P49917 AL353621.2-201ENST00000605340 133 ntBASIC0.44□□□□□ -2.34
LIG4P49917 U6.106-201ENST00000636360 105 ntBASIC0.44□□□□□ -2.34
LIG4P49917 SNORA20.1-201ENST00000364790 130 ntBASIC0.43□□□□□ -2.34
LIG4P49917 Y_RNA.393-201ENST00000383936 102 ntBASIC0.43□□□□□ -2.34
LIG4P49917 Y_RNA.452-201ENST00000384202 108 ntBASIC0.43□□□□□ -2.34
LIG4P49917 Y_RNA.515-201ENST00000384535 112 ntBASIC0.43□□□□□ -2.34
LIG4P49917 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.43□□□□□ -2.34
LIG4P49917 MTND5P32-201ENST00000560711 1802 ntBASIC0.43□□□□□ -2.34
LIG4P49917 Y_RNA.75-201ENST00000362927 97 ntBASIC0.42□□□□□ -2.34
LIG4P49917 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
LIG4P49917 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
LIG4P49917 RNU6-702P-201ENST00000364982 107 ntBASIC0.42□□□□□ -2.34
LIG4P49917 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
LIG4P49917 SNORA18-201ENST00000384416 132 ntBASIC0.42□□□□□ -2.34
LIG4P49917 Y_RNA.521-201ENST00000384560 114 ntBASIC0.42□□□□□ -2.34
LIG4P49917 RNU6-893P-201ENST00000458841 100 ntBASIC0.42□□□□□ -2.34
LIG4P49917 RNA5SP94-201ENST00000516917 108 ntBASIC0.42□□□□□ -2.34
LIG4P49917 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
LIG4P49917 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
LIG4P49917 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
LIG4P49917 RNU6-403P-201ENST00000363163 104 ntBASIC0.41□□□□□ -2.34
LIG4P49917 SNORD114-26-201ENST00000363543 72 ntBASIC0.41□□□□□ -2.34
LIG4P49917 RNY1P11-201ENST00000363759 113 ntBASIC0.41□□□□□ -2.34
LIG4P49917 Y_RNA.435-201ENST00000384095 112 ntBASIC0.41□□□□□ -2.34
LIG4P49917 RNU6-196P-201ENST00000384315 107 ntBASIC0.41□□□□□ -2.34
LIG4P49917 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
LIG4P49917 RNA5SP236-201ENST00000516169 116 ntBASIC0.41□□□□□ -2.34
LIG4P49917 SNORA25.12-201ENST00000516202 82 ntBASIC0.41□□□□□ -2.34
LIG4P49917 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.41□□□□□ -2.34
LIG4P49917 MIR3149-201ENST00000584629 83 ntBASIC0.41□□□□□ -2.34
LIG4P49917 MIR411-201ENST00000362239 96 ntBASIC0.4□□□□□ -2.35
LIG4P49917 Y_RNA.13-201ENST00000362403 112 ntBASIC0.4□□□□□ -2.35
LIG4P49917 RNU6-1082P-201ENST00000364574 107 ntBASIC0.4□□□□□ -2.35
LIG4P49917 RNU6-949P-201ENST00000384040 107 ntBASIC0.4□□□□□ -2.35
LIG4P49917 RNY1P6-201ENST00000384193 109 ntBASIC0.4□□□□□ -2.35
LIG4P49917 AC022559.1-201ENST00000520905 205 ntBASIC0.4□□□□□ -2.35
LIG4P49917 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
LIG4P49917 AC130289.1-201ENST00000577321 73 ntBASIC0.4□□□□□ -2.35
LIG4P49917 MIR4431-201ENST00000579990 94 ntBASIC0.4□□□□□ -2.35
LIG4P49917 AC009779.6-201ENST00000603972 165 ntBASIC0.4□□□□□ -2.35
LIG4P49917 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
LIG4P49917 uc_338.16-201ENST00000621804 95 ntBASIC0.4□□□□□ -2.35
LIG4P49917 RNU6-349P-201ENST00000362402 107 ntBASIC0.39□□□□□ -2.35
LIG4P49917 Y_RNA.274-201ENST00000364714 101 ntBASIC0.39□□□□□ -2.35
LIG4P49917 RNU6-463P-201ENST00000384340 107 ntBASIC0.39□□□□□ -2.35
LIG4P49917 Y_RNA.588-201ENST00000391254 102 ntBASIC0.39□□□□□ -2.35
LIG4P49917 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
LIG4P49917 RNU5E-9P-201ENST00000411164 104 ntBASIC0.39□□□□□ -2.35
LIG4P49917 Y_RNA.757-201ENST00000578934 114 ntBASIC0.39□□□□□ -2.35
LIG4P49917 MIR4491-201ENST00000581087 68 ntBASIC0.39□□□□□ -2.35
LIG4P49917 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.39□□□□□ -2.35
LIG4P49917 Y_RNA.200-201ENST00000364018 102 ntBASIC0.38□□□□□ -2.35
LIG4P49917 RNU6-768P-201ENST00000384683 107 ntBASIC0.38□□□□□ -2.35
LIG4P49917 MIR193B-201ENST00000384907 83 ntBASIC0.38□□□□□ -2.35
LIG4P49917 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
LIG4P49917 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
LIG4P49917 RNU6-1219P-201ENST00000516143 112 ntBASIC0.38□□□□□ -2.35
LIG4P49917 RNU2-60P-201ENST00000517290 128 ntBASIC0.38□□□□□ -2.35
LIG4P49917 AC133485.4-201ENST00000561835 220 ntBASIC0.38□□□□□ -2.35
LIG4P49917 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
LIG4P49917 Y_RNA.52-201ENST00000362760 96 ntBASIC0.37□□□□□ -2.35
LIG4P49917 Y_RNA.83-201ENST00000363005 113 ntBASIC0.37□□□□□ -2.35
LIG4P49917 Y_RNA.144-201ENST00000363521 113 ntBASIC0.37□□□□□ -2.35
LIG4P49917 Y_RNA.171-201ENST00000363760 102 ntBASIC0.37□□□□□ -2.35
LIG4P49917 RNY1P13-201ENST00000365030 105 ntBASIC0.37□□□□□ -2.35
LIG4P49917 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
LIG4P49917 SNORA72.6-201ENST00000384520 129 ntBASIC0.37□□□□□ -2.35
LIG4P49917 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
LIG4P49917 MIR7-2-201ENST00000384970 110 ntBASIC0.37□□□□□ -2.35
LIG4P49917 AC141273.2-201ENST00000618989 130 ntBASIC0.37□□□□□ -2.35
LIG4P49917 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
LIG4P49917 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
LIG4P49917 RNA5SP144-201ENST00000410846 116 ntBASIC0.36□□□□□ -2.35
LIG4P49917 RNU6-1086P-201ENST00000410930 100 ntBASIC0.36□□□□□ -2.35
LIG4P49917 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
LIG4P49917 RNU6-765P-201ENST00000516916 99 ntBASIC0.36□□□□□ -2.35
LIG4P49917 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
LIG4P49917 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.36□□□□□ -2.35
LIG4P49917 RNU6-508P-201ENST00000363231 103 ntBASIC0.35□□□□□ -2.35
LIG4P49917 RNU6-1020P-201ENST00000363684 107 ntBASIC0.35□□□□□ -2.35
LIG4P49917 Y_RNA.470-201ENST00000384307 117 ntBASIC0.35□□□□□ -2.35
LIG4P49917 MIR644A-201ENST00000385262 94 ntBASIC0.35□□□□□ -2.35
LIG4P49917 MIR1270-201ENST00000459320 83 ntBASIC0.35□□□□□ -2.35
LIG4P49917 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
LIG4P49917 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
LIG4P49917 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
LIG4P49917 RNU7-113P-201ENST00000459273 62 ntBASIC0.34□□□□□ -2.36
LIG4P49917 AC107027.2-201ENST00000512197 115 ntBASIC0.34□□□□□ -2.36
LIG4P49917 RNU7-79P-201ENST00000516082 62 ntBASIC0.34□□□□□ -2.36
LIG4P49917 AC022523.2-201ENST00000561045 150 ntBASIC0.34□□□□□ -2.36
LIG4P49917 MIR1273G-201ENST00000577677 100 ntBASIC0.34□□□□□ -2.36
LIG4P49917 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms