Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MIR193B-201ENST00000384907 83 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 MIR1302-6-201ENST00000408466 90 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 RNY3P16-201ENST00000516338 101 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 RNU6-1153P-201ENST00000516760 105 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 RNU6-135P-201ENST00000516769 101 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 RNU6-1149P-201ENST00000516810 97 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
CSNK1A1P48729 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 RNU6-578P-201ENST00000390980 103 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 RNU7-79P-201ENST00000516082 62 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.01□□□□□ -2.41
CSNK1A1P48729 MIR4639-201ENST00000584938 69 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 AC244669.1-204ENST00000621564 178 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 AC091304.10-201ENST00000641554 121 ntBASIC-0.01□□□□□ -2.41
CSNK1A1P48729 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 MIR624-201ENST00000385217 97 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 RNU6-127P-201ENST00000390897 107 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 RNA5SP127-201ENST00000411051 133 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 AC044792.1-201ENST00000593294 196 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.02□□□□□ -2.41
CSNK1A1P48729 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 MIR613-201ENST00000385248 95 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 RNU6-893P-201ENST00000458841 100 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 RNU6-531P-201ENST00000516694 104 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.03□□□□□ -2.41
CSNK1A1P48729 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU6-848P-201ENST00000515948 107 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU6-617P-201ENST00000516147 107 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU6-473P-201ENST00000516164 107 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU7-35P-201ENST00000517174 62 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 RNU2-4P-201ENST00000606190 192 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 U6.104-201ENST00000637979 90 ntBASIC-0.04□□□□□ -2.42
CSNK1A1P48729 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 SNORA63.5-201ENST00000363548 123 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 MIR643-201ENST00000385267 97 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 RNA5SP144-201ENST00000410846 116 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 MIR4768-201ENST00000585270 74 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
CSNK1A1P48729 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MIR330-201ENST00000362196 94 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNA5SP133-201ENST00000363368 119 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNY4P28-201ENST00000365281 93 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNY1P6-201ENST00000384193 109 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNU6-493P-201ENST00000391321 108 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MIR548F4-201ENST00000408515 105 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MIR1273G-201ENST00000577677 100 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 MIR499B-201ENST00000636498 73 ntBASIC-0.06□□□□□ -2.42
CSNK1A1P48729 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 RNU6-756P-201ENST00000383997 107 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 RNU6-643P-201ENST00000384018 107 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 RNU7-129P-201ENST00000516128 62 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 DEFB131E-201ENST00000532329 154 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.07□□□□□ -2.42
CSNK1A1P48729 MIR411-201ENST00000362239 96 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 SNORD115-2-201ENST00000362842 82 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 RNU4-58P-201ENST00000363192 141 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 SNORD115-20-201ENST00000365099 82 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 RNU6-716P-201ENST00000365621 103 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.08□□□□□ -2.42
CSNK1A1P48729 RNU7-113P-201ENST00000459273 62 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 RPL39P34-201ENST00000477141 156 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 RNA5SP33-201ENST00000516687 98 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 AC138749.4-201ENST00000563970 127 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 U6.109-201ENST00000636749 87 ntBASIC-0.08□□□□□ -2.42
CSNK1A1P48729 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.09□□□□□ -2.42
CSNK1A1P48729 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.09□□□□□ -2.42
CSNK1A1P48729 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.09□□□□□ -2.42
CSNK1A1P48729 SNORA25.7-201ENST00000364375 127 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms