Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNU6-47P-201ENST00000383866 107 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNY3P5-201ENST00000384127 102 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 SNORD116-2-201ENST00000384274 95 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNU4-70P-201ENST00000384579 139 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 SNORD116-6-201ENST00000384711 96 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
RPL28P46779 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.78□□□□□ -2.53
RPL28P46779 SNRPGP8-201ENST00000454064 226 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNU7-137P-201ENST00000516788 62 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 SNORA20.3-201ENST00000516880 132 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 MIR4473-201ENST00000583731 91 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 AC113139.1-201ENST00000605049 239 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 SNORD58B-201ENST00000607313 66 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 AL008718.3-201ENST00000610217 321 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 AC093726.3-201ENST00000637588 150 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 RNU4-90P-201ENST00000362773 141 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 RNU1-115P-201ENST00000365329 160 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 RNU6-429P-201ENST00000384582 108 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 MIR9-2-201ENST00000384838 87 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 AL731563.1-201ENST00000442202 214 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 AC097635.1-201ENST00000450678 155 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 AL359881.1-201ENST00000602916 267 ntBASIC-0.79□□□□□ -2.54
RPL28P46779 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 SNORD81.2-201ENST00000365153 76 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 MIR539-201ENST00000365690 78 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 MIR635-201ENST00000384830 98 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 RNU4-63P-201ENST00000411313 118 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 MTND4LP30-201ENST00000454092 297 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 RNU7-70P-201ENST00000516941 66 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 uc_338.10-201ENST00000621872 182 ntBASIC-0.8□□□□□ -2.54
RPL28P46779 SNORD95.1-201ENST00000364099 68 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 RNU4-16P-201ENST00000364737 141 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 SNORD116-29-201ENST00000384516 83 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 RNY4P36-201ENST00000391116 96 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 SNORA53-201ENST00000391141 249 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 RNA5SP25-201ENST00000410815 110 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 AC093423.1-201ENST00000440817 142 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 RNU7-74P-201ENST00000459104 62 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 SNORD67.1-201ENST00000516618 108 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
RPL28P46779 MTND5P40-201ENST00000559945 246 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 AL365205.2-201ENST00000594586 68 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 AC084782.3-201ENST00000612282 578 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 AC069503.3-201ENST00000618674 145 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 AC104985.2-201ENST00000620598 500 ntBASIC-0.81□□□□□ -2.54
RPL28P46779 SNORD114-29-201ENST00000364819 70 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 RNU6-662P-201ENST00000384253 104 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 MT-TQ-201ENST00000387372 72 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
RPL28P46779 SNORD115-46-201ENST00000390982 71 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 RNU6-735P-201ENST00000410612 107 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 RNA5SP395-201ENST00000516567 118 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 AC040926.1-201ENST00000530195 238 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 MIR548AE1-201ENST00000583292 70 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 snoU18.1-201ENST00000629629 71 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 MTND4LP32-201ENST00000636111 270 ntBASIC-0.82□□□□□ -2.54
RPL28P46779 SNORD115-2-201ENST00000362842 82 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 SNORD114-10-201ENST00000363409 72 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 SNORD115-20-201ENST00000365099 82 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 SNORD56B-201ENST00000384713 71 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.83□□□□□ -2.54
RPL28P46779 RNU7-13P-201ENST00000516413 62 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 YWHAEP2-201ENST00000580066 112 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 MIR548AG2-201ENST00000581228 64 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 AC092794.1-201ENST00000612734 582 ntBASIC-0.83□□□□□ -2.54
RPL28P46779 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 MIR519E-201ENST00000385075 84 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 MIR519A1-201ENST00000385257 85 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 MT-TT-201ENST00000387460 66 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 RNA5SP144-201ENST00000410846 116 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 SCARNA15-202ENST00000516881 127 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 MIR4280-201ENST00000582178 76 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 AC080013.6-201ENST00000606185 215 ntBASIC-0.84□□□□□ -2.54
RPL28P46779 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 SNORA32-201ENST00000384072 121 ntBASIC-0.85□□□□□ -2.55
RPL28P46779 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms