Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC113410.1-201ENST00000505029 247 ntBASIC0.73□□□□□ -2.29
SOX3P41225 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
SOX3P41225 RNU6-240P-201ENST00000516098 97 ntBASIC0.73□□□□□ -2.29
SOX3P41225 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
SOX3P41225 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
SOX3P41225 RNU2-35P-201ENST00000516446 142 ntBASIC0.73□□□□□ -2.29
SOX3P41225 Y_RNA.757-201ENST00000578934 114 ntBASIC0.73□□□□□ -2.29
SOX3P41225 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.73□□□□□ -2.29
SOX3P41225 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SOX3P41225 MIR30D-201ENST00000362283 70 ntBASIC0.72□□□□□ -2.29
SOX3P41225 SNORA22.1-201ENST00000362701 134 ntBASIC0.72□□□□□ -2.29
SOX3P41225 RNU6-915P-201ENST00000364943 103 ntBASIC0.72□□□□□ -2.29
SOX3P41225 Y_RNA.355-201ENST00000365462 98 ntBASIC0.72□□□□□ -2.29
SOX3P41225 Y_RNA.366-201ENST00000365540 102 ntBASIC0.72□□□□□ -2.29
SOX3P41225 Y_RNA.420-201ENST00000384043 110 ntBASIC0.72□□□□□ -2.29
SOX3P41225 RNU6-342P-201ENST00000384521 104 ntBASIC0.72□□□□□ -2.29
SOX3P41225 RNU6-1165P-201ENST00000410119 107 ntBASIC0.72□□□□□ -2.29
SOX3P41225 RNA5SP144-201ENST00000410846 116 ntBASIC0.72□□□□□ -2.29
SOX3P41225 AC096949.1-201ENST00000412047 152 ntBASIC0.72□□□□□ -2.29
SOX3P41225 AL512326.2-201ENST00000426359 151 ntBASIC0.72□□□□□ -2.29
SOX3P41225 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
SOX3P41225 Y_RNA.690-201ENST00000516603 95 ntBASIC0.72□□□□□ -2.29
SOX3P41225 MIR3121-201ENST00000579680 77 ntBASIC0.72□□□□□ -2.29
SOX3P41225 MIR548X2-201ENST00000579776 100 ntBASIC0.72□□□□□ -2.29
SOX3P41225 RMST_2.1-201ENST00000617263 136 ntBASIC0.72□□□□□ -2.29
SOX3P41225 MIR6734-201ENST00000621166 68 ntBASIC0.72□□□□□ -2.29
SOX3P41225 Y_RNA.120-201ENST00000363304 110 ntBASIC0.71□□□□□ -2.3
SOX3P41225 Y_RNA.280-201ENST00000364765 112 ntBASIC0.71□□□□□ -2.3
SOX3P41225 Y_RNA.508-201ENST00000384502 114 ntBASIC0.71□□□□□ -2.3
SOX3P41225 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
SOX3P41225 AL603914.1-201ENST00000401964 204 ntBASIC0.71□□□□□ -2.3
SOX3P41225 RNU6-893P-201ENST00000458841 100 ntBASIC0.71□□□□□ -2.3
SOX3P41225 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
SOX3P41225 AC020891.4-201ENST00000605745 93 ntBASIC0.71□□□□□ -2.3
SOX3P41225 AC010332.2-201ENST00000613083 1904 ntBASIC0.71□□□□□ -2.3
SOX3P41225 RNU6-187P-201ENST00000384139 106 ntBASIC0.7□□□□□ -2.3
SOX3P41225 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
SOX3P41225 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
SOX3P41225 MT-TI-201ENST00000387365 69 ntBASIC0.7□□□□□ -2.3
SOX3P41225 RNU6-1223P-201ENST00000517124 104 ntBASIC0.7□□□□□ -2.3
SOX3P41225 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
SOX3P41225 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
SOX3P41225 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.7□□□□□ -2.3
SOX3P41225 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SOX3P41225 RNU6-1104P-201ENST00000384723 104 ntBASIC0.69□□□□□ -2.3
SOX3P41225 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
SOX3P41225 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
SOX3P41225 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
SOX3P41225 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SOX3P41225 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
SOX3P41225 SNORD99-201ENST00000408612 74 ntBASIC0.69□□□□□ -2.3
SOX3P41225 RNU6-257P-201ENST00000410238 98 ntBASIC0.69□□□□□ -2.3
SOX3P41225 MTND4LP9-201ENST00000427694 174 ntBASIC0.69□□□□□ -2.3
SOX3P41225 MTATP6P21-201ENST00000440681 189 ntBASIC0.69□□□□□ -2.3
SOX3P41225 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
SOX3P41225 AC022523.2-201ENST00000561045 150 ntBASIC0.69□□□□□ -2.3
SOX3P41225 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
SOX3P41225 RNU6-690P-201ENST00000365242 106 ntBASIC0.68□□□□□ -2.3
SOX3P41225 RNY1P5-201ENST00000383890 115 ntBASIC0.68□□□□□ -2.3
SOX3P41225 RNU6-1062P-201ENST00000383908 107 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR513C-201ENST00000401352 84 ntBASIC0.68□□□□□ -2.3
SOX3P41225 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
SOX3P41225 RNU7-123P-201ENST00000515911 60 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR4804-201ENST00000581683 73 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR4676-201ENST00000583078 72 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR3133-201ENST00000583157 78 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR4305-201ENST00000583252 102 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
SOX3P41225 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.68□□□□□ -2.3
SOX3P41225 AC011603.4-201ENST00000611325 277 ntBASIC0.68□□□□□ -2.3
SOX3P41225 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
SOX3P41225 AP001340.1-201ENST00000624405 217 ntBASIC0.68□□□□□ -2.3
SOX3P41225 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
SOX3P41225 Y_RNA.118-201ENST00000363300 101 ntBASIC0.67□□□□□ -2.3
SOX3P41225 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SOX3P41225 Y_RNA.488-201ENST00000384403 102 ntBASIC0.67□□□□□ -2.3
SOX3P41225 SNORA18-201ENST00000384416 132 ntBASIC0.67□□□□□ -2.3
SOX3P41225 Y_RNA.568-201ENST00000384742 113 ntBASIC0.67□□□□□ -2.3
SOX3P41225 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.67□□□□□ -2.3
SOX3P41225 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
SOX3P41225 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.67□□□□□ -2.3
SOX3P41225 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
SOX3P41225 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
SOX3P41225 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
SOX3P41225 RNU5E-3P-201ENST00000515913 68 ntBASIC0.67□□□□□ -2.3
SOX3P41225 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
SOX3P41225 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
SOX3P41225 Y_RNA.114-201ENST00000363265 113 ntBASIC0.66□□□□□ -2.3
SOX3P41225 RNY1P13-201ENST00000365030 105 ntBASIC0.66□□□□□ -2.3
SOX3P41225 SNORD18B-201ENST00000365659 72 ntBASIC0.66□□□□□ -2.3
SOX3P41225 Y_RNA.525-201ENST00000384570 113 ntBASIC0.66□□□□□ -2.3
SOX3P41225 MIR125B2-201ENST00000385128 89 ntBASIC0.66□□□□□ -2.3
SOX3P41225 U8.15-201ENST00000390947 134 ntBASIC0.66□□□□□ -2.3
SOX3P41225 RNU6-781P-201ENST00000516377 101 ntBASIC0.66□□□□□ -2.3
SOX3P41225 AC133485.4-201ENST00000561835 220 ntBASIC0.66□□□□□ -2.3
SOX3P41225 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
SOX3P41225 AC141846.1-201ENST00000568348 142 ntBASIC0.66□□□□□ -2.3
SOX3P41225 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
SOX3P41225 AC138907.4-201ENST00000570107 226 ntBASIC0.66□□□□□ -2.3
SOX3P41225 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms