Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 Y_RNA.470-201ENST00000384307 117 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 RNU6-476P-201ENST00000384726 107 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 MIR548A1-201ENST00000385041 97 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.07□□□□□ -2.24
TIMP3P35625 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 RNU11-2P-201ENST00000516898 142 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 AC068338.1-201ENST00000565567 176 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
TIMP3P35625 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TIMP3P35625 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TIMP3P35625 RNY4P6-201ENST00000363667 96 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 Y_RNA.191-201ENST00000363972 113 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 SNORD12C-201ENST00000386307 89 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 MT-TI-201ENST00000387365 69 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 RNU4-69P-201ENST00000410677 143 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 AC244023.1-201ENST00000426884 112 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.06□□□□□ -2.24
TIMP3P35625 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 RNU7-6P-201ENST00000516845 62 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 MIR3163-201ENST00000581592 73 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 AP000753.3-201ENST00000604083 169 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 AC242498.1-201ENST00000604134 111 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 MIR6516-201ENST00000630554 81 ntBASIC1.06□□□□□ -2.24
TIMP3P35625 Y_RNA.116-201ENST00000363292 103 ntBASIC1.05□□□□□ -2.24
TIMP3P35625 SNORD116-21-201ENST00000384507 92 ntBASIC1.05□□□□□ -2.24
TIMP3P35625 MIR518E-201ENST00000385252 88 ntBASIC1.05□□□□□ -2.24
TIMP3P35625 AC007012.1-201ENST00000567192 175 ntBASIC1.05□□□□□ -2.24
TIMP3P35625 MIR548AE2-201ENST00000583456 67 ntBASIC1.05□□□□□ -2.24
TIMP3P35625 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.05□□□□□ -2.24
TIMP3P35625 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
TIMP3P35625 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
TIMP3P35625 SNORA32-201ENST00000384072 121 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 SNORA18-201ENST00000384416 132 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 RNU6-1237P-201ENST00000384777 107 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 MT-TN-201ENST00000387400 73 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 MIR4452-201ENST00000583004 71 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 MIR4264-201ENST00000583520 66 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 MIR6129-201ENST00000616087 109 ntBASIC1.04□□□□□ -2.24
TIMP3P35625 RNU6-654P-201ENST00000364373 107 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 RNU6-1325P-201ENST00000364905 105 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 RNU6-342P-201ENST00000384521 104 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 MIR588-201ENST00000384900 83 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 RNU6-205P-201ENST00000390858 107 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 RNA5SP237-201ENST00000410414 113 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.03□□□□□ -2.24
TIMP3P35625 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
TIMP3P35625 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
TIMP3P35625 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 Y_RNA.330-201ENST00000365230 109 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 RNU6-880P-201ENST00000384526 107 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 SNORD20-201ENST00000384550 80 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 RNU6-429P-201ENST00000384582 108 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 MIR548D2-201ENST00000384955 97 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 SNORD77B-201ENST00000391112 67 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
TIMP3P35625 Y_RNA.35-201ENST00000362601 101 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 SNORA75.2-201ENST00000391138 150 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 SNORA75.3-201ENST00000391231 150 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 RNA5SP95-201ENST00000410319 137 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 RNU6-1086P-201ENST00000410930 100 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 RNU7-79P-201ENST00000516082 62 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 SNORA70.22-201ENST00000517160 124 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 RNU7-35P-201ENST00000517174 62 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 MIR4679-2-201ENST00000578358 77 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 AC087741.2-201ENST00000619415 172 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 AL589743.1-201ENST00000551932 2712 ntBASIC1.01□□□□□ -2.25
TIMP3P35625 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
TIMP3P35625 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
TIMP3P35625 RNU6-215P-201ENST00000365169 102 ntBASIC1□□□□□ -2.25
TIMP3P35625 Y_RNA.344-201ENST00000365381 112 ntBASIC1□□□□□ -2.25
TIMP3P35625 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
TIMP3P35625 Y_RNA.362-201ENST00000365518 110 ntBASIC1□□□□□ -2.25
TIMP3P35625 Y_RNA.363-201ENST00000365529 113 ntBASIC1□□□□□ -2.25
TIMP3P35625 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
TIMP3P35625 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
TIMP3P35625 MIR6740-201ENST00000618268 113 ntBASIC1□□□□□ -2.25
TIMP3P35625 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1□□□□□ -2.25
TIMP3P35625 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 SNORA63.5-201ENST00000363548 123 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 RNU1-93P-201ENST00000364704 169 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 Y_RNA.549-201ENST00000384657 102 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 RNU6-412P-201ENST00000516434 106 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 RNU6-589P-201ENST00000516485 107 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 RNU6-919P-201ENST00000516731 104 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 Y_RNA.709-201ENST00000516952 92 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms