Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SNORD115-10-201ENST00000365073 81 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-43-201ENST00000365503 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-36-201ENST00000365629 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD28B-201ENST00000390993 75 ntBASIC1.17□□□□□ -2.22
KRT9P35527 AL035398.1-201ENST00000430869 322 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNU7-164P-201ENST00000459221 62 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNU7-96P-201ENST00000459535 64 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RPS29P24-201ENST00000486345 171 ntBASIC1.17□□□□□ -2.22
KRT9P35527 COX6CP6-201ENST00000490840 228 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNU6-589P-201ENST00000516485 107 ntBASIC1.17□□□□□ -2.22
KRT9P35527 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
KRT9P35527 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
KRT9P35527 AC021443.1-201ENST00000604478 211 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-40-201ENST00000606510 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 AC008133.2-201ENST00000624540 351 ntBASIC1.17□□□□□ -2.22
KRT9P35527 RNU6-880P-201ENST00000384526 107 ntBASIC1.16□□□□□ -2.22
KRT9P35527 MIR1185-1-201ENST00000408598 86 ntBASIC1.16□□□□□ -2.22
KRT9P35527 RNU7-67P-201ENST00000459003 62 ntBASIC1.16□□□□□ -2.22
KRT9P35527 RNU6-412P-201ENST00000516434 106 ntBASIC1.16□□□□□ -2.22
KRT9P35527 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
KRT9P35527 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
KRT9P35527 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRT9P35527 Y_RNA.35-201ENST00000362601 101 ntBASIC1.15□□□□□ -2.23
KRT9P35527 SNORA63.4-201ENST00000362763 126 ntBASIC1.15□□□□□ -2.23
KRT9P35527 Y_RNA.198-201ENST00000364013 98 ntBASIC1.15□□□□□ -2.23
KRT9P35527 Y_RNA.213-201ENST00000364178 111 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNU6-153P-201ENST00000364422 104 ntBASIC1.15□□□□□ -2.23
KRT9P35527 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
KRT9P35527 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
KRT9P35527 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNU6-998P-201ENST00000515894 101 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNA5SP436-201ENST00000516020 115 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNY4P20-201ENST00000516678 93 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
KRT9P35527 AC007012.1-201ENST00000567192 175 ntBASIC1.15□□□□□ -2.23
KRT9P35527 MIR4305-201ENST00000583252 102 ntBASIC1.15□□□□□ -2.23
KRT9P35527 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
KRT9P35527 RNY4P6-201ENST00000363667 96 ntBASIC1.14□□□□□ -2.23
KRT9P35527 Y_RNA.298-201ENST00000364960 107 ntBASIC1.14□□□□□ -2.23
KRT9P35527 SNORD114-24-201ENST00000365029 72 ntBASIC1.14□□□□□ -2.23
KRT9P35527 RNU2-11P-201ENST00000459191 187 ntBASIC1.14□□□□□ -2.23
KRT9P35527 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
KRT9P35527 RNU7-53P-201ENST00000516705 60 ntBASIC1.14□□□□□ -2.23
KRT9P35527 MIR3152-201ENST00000579801 74 ntBASIC1.14□□□□□ -2.23
KRT9P35527 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
KRT9P35527 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
KRT9P35527 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
KRT9P35527 MIR4251-201ENST00000635819 61 ntBASIC1.14□□□□□ -2.23
KRT9P35527 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.14□□□□□ -2.23
KRT9P35527 RNU4-16P-201ENST00000364737 141 ntBASIC1.13□□□□□ -2.23
KRT9P35527 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
KRT9P35527 RNA5SP261-201ENST00000410536 106 ntBASIC1.13□□□□□ -2.23
KRT9P35527 AL022718.1-201ENST00000412004 84 ntBASIC1.13□□□□□ -2.23
KRT9P35527 RNU6-893P-201ENST00000458841 100 ntBASIC1.13□□□□□ -2.23
KRT9P35527 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
KRT9P35527 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
KRT9P35527 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
KRT9P35527 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
KRT9P35527 RNU6-755P-201ENST00000364400 103 ntBASIC1.12□□□□□ -2.23
KRT9P35527 RNU7-123P-201ENST00000515911 60 ntBASIC1.12□□□□□ -2.23
KRT9P35527 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
KRT9P35527 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
KRT9P35527 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.12□□□□□ -2.23
KRT9P35527 MIR6779-201ENST00000617283 64 ntBASIC1.12□□□□□ -2.23
KRT9P35527 AC243994.1-201ENST00000618627 109 ntBASIC1.12□□□□□ -2.23
KRT9P35527 AC021613.1-201ENST00000623880 111 ntBASIC1.12□□□□□ -2.23
KRT9P35527 AL589743.1-201ENST00000551932 2712 ntBASIC1.12□□□□□ -2.23
KRT9P35527 SNORD12C-201ENST00000386307 89 ntBASIC1.11□□□□□ -2.23
KRT9P35527 RNU6-1319P-201ENST00000390855 104 ntBASIC1.11□□□□□ -2.23
KRT9P35527 RNU6-747P-201ENST00000390928 104 ntBASIC1.11□□□□□ -2.23
KRT9P35527 RNU6-241P-201ENST00000391148 104 ntBASIC1.11□□□□□ -2.23
KRT9P35527 RNU6-177P-201ENST00000411257 104 ntBASIC1.11□□□□□ -2.23
KRT9P35527 RNU2-35P-201ENST00000516446 142 ntBASIC1.11□□□□□ -2.23
KRT9P35527 MIR4679-2-201ENST00000578358 77 ntBASIC1.11□□□□□ -2.23
KRT9P35527 MIR4791-201ENST00000607666 84 ntBASIC1.11□□□□□ -2.23
KRT9P35527 SNORA63.5-201ENST00000363548 123 ntBASIC1.1□□□□□ -2.23
KRT9P35527 Y_RNA.281-201ENST00000364774 94 ntBASIC1.1□□□□□ -2.23
KRT9P35527 SNORA51.10-201ENST00000384418 136 ntBASIC1.1□□□□□ -2.23
KRT9P35527 Y_RNA.537-201ENST00000384626 109 ntBASIC1.1□□□□□ -2.23
KRT9P35527 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
KRT9P35527 RNA5SP144-201ENST00000410846 116 ntBASIC1.1□□□□□ -2.23
KRT9P35527 AL031737.1-201ENST00000450125 223 ntBASIC1.1□□□□□ -2.23
KRT9P35527 RNU7-45P-201ENST00000459460 63 ntBASIC1.1□□□□□ -2.23
KRT9P35527 RNU2-13P-201ENST00000515909 113 ntBASIC1.1□□□□□ -2.23
KRT9P35527 RNU7-6P-201ENST00000516845 62 ntBASIC1.1□□□□□ -2.23
KRT9P35527 MIR3163-201ENST00000581592 73 ntBASIC1.1□□□□□ -2.23
KRT9P35527 Y_RNA.49-201ENST00000362714 112 ntBASIC1.09□□□□□ -2.23
KRT9P35527 Y_RNA.85-201ENST00000363014 111 ntBASIC1.09□□□□□ -2.23
KRT9P35527 RNU6-1107P-201ENST00000364817 104 ntBASIC1.09□□□□□ -2.23
KRT9P35527 SNORA24-201ENST00000384096 131 ntBASIC1.09□□□□□ -2.23
KRT9P35527 Y_RNA.531-201ENST00000384589 121 ntBASIC1.09□□□□□ -2.23
KRT9P35527 Y_RNA.549-201ENST00000384657 102 ntBASIC1.09□□□□□ -2.23
KRT9P35527 RNU6-1104P-201ENST00000384723 104 ntBASIC1.09□□□□□ -2.23
KRT9P35527 MIR1302-5-201ENST00000408164 150 ntBASIC1.09□□□□□ -2.23
KRT9P35527 AL512326.2-201ENST00000426359 151 ntBASIC1.09□□□□□ -2.23
KRT9P35527 RNU7-73P-201ENST00000458743 63 ntBASIC1.09□□□□□ -2.23
KRT9P35527 RNU7-113P-201ENST00000459273 62 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms