Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 MT-TN-201ENST00000387400 73 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RNU6-205P-201ENST00000390858 107 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RNU6-613P-201ENST00000410412 108 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RNU6-772P-201ENST00000516042 105 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 AC012676.2-201ENST00000619258 186 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 Y_RNA.127-201ENST00000363386 109 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 SNORD58C-201ENST00000365223 64 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 RNA5SP136-201ENST00000410906 107 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 AC113410.1-201ENST00000505029 247 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 RNU6-1333P-201ENST00000516162 93 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 RNU6-659P-201ENST00000516454 104 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 RNU6-62P-201ENST00000516526 102 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 RNA5SP33-201ENST00000516687 98 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 MIR4264-201ENST00000583520 66 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 MIR151B-201ENST00000584249 96 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 AL365222.1-201ENST00000614661 98 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 MIR6788-201ENST00000618842 66 ntBASIC1.22□□□□□ -2.21
HOXD12P35452 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HOXD12P35452 SNORD114-26-201ENST00000363543 72 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 Y_RNA.470-201ENST00000384307 117 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 Y_RNA.528-201ENST00000384575 108 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 SNORA2B-201ENST00000384583 137 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 RNU6-1237P-201ENST00000384777 107 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 Y_RNA.630-201ENST00000411370 108 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 AC008267.6-201ENST00000441664 139 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
HOXD12P35452 AC025166.1-201ENST00000612411 163 ntBASIC1.21□□□□□ -2.22
HOXD12P35452 SNORD115-2-201ENST00000362842 82 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 Y_RNA.261-201ENST00000364631 102 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 SNORD115-20-201ENST00000365099 82 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 SNORD113-1-201ENST00000365321 69 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 RNU6-22P-201ENST00000384355 107 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 RNU6-1104P-201ENST00000384723 104 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 MIR588-201ENST00000384900 83 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 snoU13.2-201ENST00000459201 104 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 AC022523.2-201ENST00000561045 150 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 MIR6515-201ENST00000619843 57 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
HOXD12P35452 SNORD113.3-201ENST00000364630 78 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 SNORA18-201ENST00000384416 132 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 RNU7-62P-201ENST00000458856 62 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 AC023827.1-201ENST00000569247 97 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 U2.22-201ENST00000636441 106 ntBASIC1.19□□□□□ -2.22
HOXD12P35452 MTND5P18-201ENST00000445624 1801 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 Y_RNA.346-201ENST00000365385 112 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 RNU6-342P-201ENST00000384521 104 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 MIRLET7F2-201ENST00000385277 83 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 RNA5SP237-201ENST00000410414 113 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 Y_RNA.712-201ENST00000517011 92 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
HOXD12P35452 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
HOXD12P35452 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 Y_RNA.168-201ENST00000363740 102 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 Y_RNA.198-201ENST00000364013 98 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 Y_RNA.299-201ENST00000364973 94 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 RNU6-580P-201ENST00000365159 107 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 RNU6-1168P-201ENST00000390831 104 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 RNU6-1154P-201ENST00000391001 104 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 COX6CP6-201ENST00000490840 228 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 MIR548AE2-201ENST00000583456 67 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 MIR3914-2-201ENST00000637339 95 ntBASIC1.17□□□□□ -2.22
HOXD12P35452 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXD12P35452 Y_RNA.213-201ENST00000364178 111 ntBASIC1.16□□□□□ -2.22
HOXD12P35452 SNORA32-201ENST00000384072 121 ntBASIC1.16□□□□□ -2.22
HOXD12P35452 SNORD111-201ENST00000408139 94 ntBASIC1.16□□□□□ -2.22
HOXD12P35452 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
HOXD12P35452 AC106800.4-201ENST00000614905 153 ntBASIC1.16□□□□□ -2.22
HOXD12P35452 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXD12P35452 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MIR598-201ENST00000384868 97 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MT-TI-201ENST00000387365 69 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 RNU4-69P-201ENST00000410677 143 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 RNU6-313P-201ENST00000516317 112 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 RNU6-479P-201ENST00000516348 105 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms