Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 RNU6-1104P-201ENST00000384723 104 ntBASIC1.44□□□□□ -2.18
SLC6A4P31645 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.44□□□□□ -2.18
SLC6A4P31645 AC022523.2-201ENST00000561045 150 ntBASIC1.44□□□□□ -2.18
SLC6A4P31645 AC007012.1-201ENST00000567192 175 ntBASIC1.44□□□□□ -2.18
SLC6A4P31645 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SLC6A4P31645 Y_RNA.470-201ENST00000384307 117 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.43□□□□□ -2.18
SLC6A4P31645 SNORA31.2-201ENST00000516019 134 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 RNA5SP220-201ENST00000516298 104 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 SEPT14P17-201ENST00000617978 177 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 MIR6516-201ENST00000630554 81 ntBASIC1.43□□□□□ -2.18
SLC6A4P31645 MIR548D2-201ENST00000384955 97 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNA5SP237-201ENST00000410414 113 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNU6-1086P-201ENST00000410930 100 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 snoU13.2-201ENST00000459201 104 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 AC048334.1-201ENST00000477975 159 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNU6-919P-201ENST00000516731 104 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 RNU7-6P-201ENST00000516845 62 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 MIR548AE2-201ENST00000583456 67 ntBASIC1.42□□□□□ -2.18
SLC6A4P31645 SNORD115-19-201ENST00000363098 82 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 SNORD115-18-201ENST00000363293 82 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 SNORD115-17-201ENST00000364612 82 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 RNU6-1325P-201ENST00000364905 105 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 RNU6-215P-201ENST00000365169 102 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 SNORA18-201ENST00000384416 132 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 MIR548A1-201ENST00000385041 97 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 AC244023.1-201ENST00000426884 112 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 RNU7-35P-201ENST00000517174 62 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 AC242498.1-201ENST00000604134 111 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
SLC6A4P31645 Y_RNA.281-201ENST00000364774 94 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 SNORA80D-201ENST00000384488 135 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 SNORD12C-201ENST00000386307 89 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 RPL39P34-201ENST00000477141 156 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 MIR6129-201ENST00000616087 109 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 AL589743.1-201ENST00000551932 2712 ntBASIC1.4□□□□□ -2.19
SLC6A4P31645 Y_RNA.49-201ENST00000362714 112 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 Y_RNA.168-201ENST00000363740 102 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 Y_RNA.362-201ENST00000365518 110 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 MIR588-201ENST00000384900 83 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 MIR7-2-201ENST00000384970 110 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 MT-TI-201ENST00000387365 69 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 SNORD12-201ENST00000391002 90 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 MRPL35P3-201ENST00000421557 364 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 RNU6-589P-201ENST00000516485 107 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
SLC6A4P31645 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.39□□□□□ -2.19
SLC6A4P31645 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 Y_RNA.35-201ENST00000362601 101 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 RNU6-580P-201ENST00000365159 107 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 SNORD20-201ENST00000384550 80 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 RNU6-429P-201ENST00000384582 108 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 MIR563-201ENST00000385080 79 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 RNU7-62P-201ENST00000458856 62 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 AC004223.1-201ENST00000479840 271 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 Y_RNA.709-201ENST00000516952 92 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 AL662814.1-201ENST00000617364 121 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 AC087741.2-201ENST00000619415 172 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
SLC6A4P31645 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SLC6A4P31645 SNORA32-201ENST00000384072 121 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 RNU6-342P-201ENST00000384521 104 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 MT-TF-201ENST00000387314 71 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 RNU6-910P-201ENST00000390844 107 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 MIR1912-201ENST00000410389 80 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 FAM71BP1-201ENST00000604431 523 ntBASIC1.37□□□□□ -2.19
SLC6A4P31645 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SLC6A4P31645 Y_RNA.85-201ENST00000363014 111 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 Y_RNA.309-201ENST00000365046 111 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 Y_RNA.507-201ENST00000384500 99 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 Y_RNA.540-201ENST00000384638 111 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
SLC6A4P31645 Y_RNA.330-201ENST00000365230 109 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 Y_RNA.344-201ENST00000365381 112 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 RNU6-205P-201ENST00000390858 107 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 RNU6-1165P-201ENST00000410119 107 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 AC063976.4-201ENST00000421971 163 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 MIR18B-201ENST00000454574 71 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 RNU7-21P-201ENST00000459430 62 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 AC141846.1-201ENST00000568348 142 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.35□□□□□ -2.19
SLC6A4P31645 AL162726.3-218ENST00000636401 95 ntBASIC1.35□□□□□ -2.19
SLC6A4P31645 SNORD114-10-201ENST00000363409 72 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms