Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC12P31275 RNU6-521P-201ENST00000516663 105 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 MIR4264-201ENST00000583520 66 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HOXC12P31275 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 MIR337-201ENST00000362281 93 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 MIR605-201ENST00000385078 83 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 AC048334.1-201ENST00000477975 159 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 SNORD67.1-201ENST00000516618 108 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 AC141557.1-201ENST00000540982 400 ntBASIC1.73□□□□□ -2.13
HOXC12P31275 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC12P31275 RNU6-766P-201ENST00000362478 107 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 RNU6-654P-201ENST00000364373 107 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 SNORD115-35-201ENST00000365122 82 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 Y_RNA.328-201ENST00000365208 113 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 Y_RNA.495-201ENST00000384435 112 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 RNU6-321P-201ENST00000410912 106 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC12P31275 AC141846.1-201ENST00000568348 142 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 AL662814.1-201ENST00000617364 121 ntBASIC1.72□□□□□ -2.13
HOXC12P31275 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HOXC12P31275 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.13
HOXC12P31275 Y_RNA.355-201ENST00000365462 98 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-32P-201ENST00000383948 107 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-13P-201ENST00000384248 107 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-12P-201ENST00000384604 107 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-41P-201ENST00000384741 107 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 MT-TN-201ENST00000387400 73 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU7-2P-201ENST00000516096 62 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 RNU6-168P-201ENST00000516189 101 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC12P31275 MIR5002-201ENST00000584713 97 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 MIR6740-201ENST00000618268 113 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC12P31275 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 AL512310.12-203ENST00000640543 90 ntBASIC1.71□□□□□ -2.14
HOXC12P31275 Y_RNA.118-201ENST00000363300 101 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNY1P13-201ENST00000365030 105 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 Y_RNA.360-201ENST00000365512 102 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 MIR206-201ENST00000384872 86 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 MIR499A-201ENST00000384903 122 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HOXC12P31275 RNU6-679P-201ENST00000391003 106 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNA5SP89-201ENST00000410300 108 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNA5SP95-201ENST00000410319 137 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 SNORA19.1-201ENST00000410656 129 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNU7-62P-201ENST00000458856 62 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNU6-717P-201ENST00000459076 104 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 SNORA31.2-201ENST00000516019 134 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 AC105081.1-201ENST00000617727 106 ntBASIC1.7□□□□□ -2.14
HOXC12P31275 RNY1P10-201ENST00000363268 113 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 SNORD114-10-201ENST00000363409 72 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 RNA5SP160-201ENST00000364866 120 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 Y_RNA.330-201ENST00000365230 109 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 RNU6-613P-201ENST00000410412 108 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 DEFB131E-201ENST00000532329 154 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 MIR8070-201ENST00000616510 88 ntBASIC1.69□□□□□ -2.14
HOXC12P31275 RNU6-1099P-201ENST00000363533 107 ntBASIC1.68□□□□□ -2.14
HOXC12P31275 RNU4-36P-201ENST00000364294 144 ntBASIC1.68□□□□□ -2.14
HOXC12P31275 MIR590-201ENST00000385008 97 ntBASIC1.68□□□□□ -2.14
HOXC12P31275 RNU7-137P-201ENST00000516788 62 ntBASIC1.68□□□□□ -2.14
HOXC12P31275 SEPT14P17-201ENST00000617978 177 ntBASIC1.68□□□□□ -2.14
HOXC12P31275 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC12P31275 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HOXC12P31275 Y_RNA.78-201ENST00000362970 110 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 MIR563-201ENST00000385080 79 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 MIR577-201ENST00000385196 96 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 RNU6-1165P-201ENST00000410119 107 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 AL353813.1-201ENST00000440700 253 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 MIR4694-201ENST00000578534 80 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
HOXC12P31275 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXC12P31275 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXC12P31275 RNY3P2-201ENST00000362918 102 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-949P-201ENST00000384040 107 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 Y_RNA.448-201ENST00000384185 108 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 SNORA2B-201ENST00000384583 137 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-1321P-201ENST00000390905 107 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-904P-201ENST00000516206 101 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-109P-201ENST00000516364 107 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-184P-201ENST00000516514 107 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-1018P-201ENST00000516577 106 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 RNU6-537P-201ENST00000517277 103 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 MIR5089-201ENST00000580047 84 ntBASIC1.66□□□□□ -2.14
HOXC12P31275 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXC12P31275 MIR377-201ENST00000362145 69 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 RNU6-832P-201ENST00000363319 107 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 RNU6-865P-201ENST00000364772 107 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms