Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Y_RNA.182-201ENST00000363880 111 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNU6-643P-201ENST00000384018 107 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 SNORD93-201ENST00000408813 74 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNU6-1045P-201ENST00000516321 107 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNU6-1149P-201ENST00000516810 97 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 RNU6-111P-201ENST00000517179 105 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 MIR4503-201ENST00000582187 83 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 U6.106-201ENST00000636360 105 ntBASIC0.31□□□□□ -2.36
HOXA9P31269 MTND5P32-201ENST00000560711 1802 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.42-201ENST00000362660 108 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 SNORA22.1-201ENST00000362701 134 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.60-201ENST00000362831 98 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNU6-275P-201ENST00000364910 107 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNU4-45P-201ENST00000365469 141 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.412-201ENST00000384001 104 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNU6-918P-201ENST00000391219 106 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.617-201ENST00000410920 90 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 AL118496.2-201ENST00000448300 230 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 RNU6-448P-201ENST00000517052 107 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 AC141846.1-201ENST00000568348 142 ntBASIC0.3□□□□□ -2.36
HOXA9P31269 Y_RNA.193-201ENST00000363979 102 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 Y_RNA.251-201ENST00000364551 99 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 RNU4-16P-201ENST00000364737 141 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 Y_RNA.478-201ENST00000384358 107 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 RNU4-70P-201ENST00000384579 139 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 MIR1302-3-201ENST00000408128 138 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 RNA5SP237-201ENST00000410414 113 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 RNU4-83P-201ENST00000410863 133 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
HOXA9P31269 RNU6-1023P-201ENST00000516137 106 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 U4.1-201ENST00000620349 87 ntBASIC0.29□□□□□ -2.36
HOXA9P31269 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 Y_RNA.13-201ENST00000362403 112 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 Y_RNA.75-201ENST00000362927 97 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 Y_RNA.447-201ENST00000384184 113 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 RNU6-574P-201ENST00000384265 107 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 MTND3P2-201ENST00000438452 342 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 RNU4-71P-201ENST00000516258 113 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 RNU7-70P-201ENST00000516941 66 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 Y_RNA.757-201ENST00000578934 114 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 MIR4491-201ENST00000581087 68 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
HOXA9P31269 Y_RNA.171-201ENST00000363760 102 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 RNU4-67P-201ENST00000364569 141 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 Y_RNA.307-201ENST00000365022 117 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 RNY1P13-201ENST00000365030 105 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 RNA5SP117-201ENST00000365294 118 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 RNU6-47P-201ENST00000383866 107 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 RNU6-949P-201ENST00000384040 107 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 SNORA18-201ENST00000384416 132 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 SNORA20-201ENST00000384662 132 ntBASIC0.27□□□□□ -2.37
HOXA9P31269 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.27□□□□□ -2.37
HOXA9P31269 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 RNU6-403P-201ENST00000363163 104 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 SNORA25.7-201ENST00000364375 127 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 RNU6-1082P-201ENST00000364574 107 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 SNORA20.1-201ENST00000364790 130 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 RNU6-768P-201ENST00000384683 107 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 MIR644A-201ENST00000385262 94 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 SNORA25.12-201ENST00000516202 82 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 AC133485.4-201ENST00000561835 220 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 MIR6082-201ENST00000613604 109 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 AC099654.10-201ENST00000640395 161 ntBASIC0.26□□□□□ -2.37
HOXA9P31269 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 Y_RNA.52-201ENST00000362760 96 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 Y_RNA.470-201ENST00000384307 117 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 RNA5SP236-201ENST00000516169 116 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 Y_RNA.681-201ENST00000516445 113 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 MIR4431-201ENST00000579990 94 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 SNORA25.18-201ENST00000607153 114 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
HOXA9P31269 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 MIR411-201ENST00000362239 96 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 RNU6-702P-201ENST00000364982 107 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 Y_RNA.435-201ENST00000384095 112 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 RNY1P6-201ENST00000384193 109 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 Y_RNA.452-201ENST00000384202 108 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 Y_RNA.521-201ENST00000384560 114 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 RNU5E-9P-201ENST00000411164 104 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 RNU7-79P-201ENST00000516082 62 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 MIR3149-201ENST00000584629 83 ntBASIC0.24□□□□□ -2.37
HOXA9P31269 Y_RNA.32-201ENST00000362589 110 ntBASIC0.23□□□□□ -2.37
HOXA9P31269 Y_RNA.200-201ENST00000364018 102 ntBASIC0.23□□□□□ -2.37
HOXA9P31269 RNU6-196P-201ENST00000384315 107 ntBASIC0.23□□□□□ -2.37
HOXA9P31269 SNORA8.2-201ENST00000384372 139 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms