Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC011603.4-201ENST00000611325 277 ntBASIC0.69□□□□□ -2.3
ABCD3P28288 RNU4-84P-201ENST00000364200 139 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 Y_RNA.240-201ENST00000364469 95 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU4-16P-201ENST00000364737 141 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU6-1336P-201ENST00000383886 109 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU6-1237P-201ENST00000384777 107 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU5E-9P-201ENST00000411164 104 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU7-102P-201ENST00000458948 62 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU6-138P-201ENST00000515952 107 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNA5SP236-201ENST00000516169 116 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 RNU7-156P-201ENST00000517214 74 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 AC090897.1-201ENST00000580909 226 ntBASIC0.68□□□□□ -2.3
ABCD3P28288 Y_RNA.29-201ENST00000362570 113 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 RNU6-1082P-201ENST00000364574 107 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 SNORD93-201ENST00000408813 74 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 RNU7-121P-201ENST00000516604 62 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 AC141846.1-201ENST00000568348 142 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 PVT1_3.1-201ENST00000620853 95 ntBASIC0.67□□□□□ -2.3
ABCD3P28288 RNU6-349P-201ENST00000362402 107 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 SNORA36.2-201ENST00000384004 127 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ABCD3P28288 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 AL022718.1-201ENST00000412004 84 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 Y_RNA.662-201ENST00000516028 97 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 DNAJC19P2-201ENST00000593340 302 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
ABCD3P28288 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ABCD3P28288 Y_RNA.257-201ENST00000364596 102 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 Y_RNA.785-201ENST00000384290 109 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 SNORA18-201ENST00000384416 132 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 RNA5SP144-201ENST00000410846 116 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 RNU6-1086P-201ENST00000410930 100 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 RNU6-1135P-201ENST00000411083 103 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
ABCD3P28288 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
ABCD3P28288 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
ABCD3P28288 SNORD37.2-201ENST00000391075 66 ntBASIC0.64□□□□□ -2.31
ABCD3P28288 RNU4-83P-201ENST00000410863 133 ntBASIC0.64□□□□□ -2.31
ABCD3P28288 SNORA81.3-201ENST00000517283 198 ntBASIC0.64□□□□□ -2.31
ABCD3P28288 RNU6-690P-201ENST00000365242 106 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 Y_RNA.441-201ENST00000384123 112 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 Y_RNA.497-201ENST00000384447 98 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 RNU6-448P-201ENST00000517052 107 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 AP003327.1-201ENST00000529684 127 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 AC008608.1-201ENST00000603910 127 ntBASIC0.63□□□□□ -2.31
ABCD3P28288 SNORD18B-201ENST00000365659 72 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 RNU6-588P-201ENST00000410281 105 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 RNU7-113P-201ENST00000459273 62 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 AC002350.1-201ENST00000490759 375 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 RNU6-861P-201ENST00000516745 106 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
ABCD3P28288 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.62□□□□□ -2.31
ABCD3P28288 SNORD115-2-201ENST00000362842 82 ntBASIC0.61□□□□□ -2.31
ABCD3P28288 SNORD115-20-201ENST00000365099 82 ntBASIC0.61□□□□□ -2.31
ABCD3P28288 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
ABCD3P28288 U8.15-201ENST00000390947 134 ntBASIC0.61□□□□□ -2.31
ABCD3P28288 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCD3P28288 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCD3P28288 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
ABCD3P28288 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
ABCD3P28288 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RNU6-682P-201ENST00000363843 106 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RNA5SP117-201ENST00000365294 118 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 Y_RNA.584-201ENST00000391090 114 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RN7SKP12-201ENST00000516275 143 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RNU6-1258P-201ENST00000516911 111 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 RNU6-765P-201ENST00000516916 99 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 MIR8066-201ENST00000617280 78 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
ABCD3P28288 Y_RNA.171-201ENST00000363760 102 ntBASIC0.59□□□□□ -2.31
ABCD3P28288 MIR4305-201ENST00000583252 102 ntBASIC0.59□□□□□ -2.31
ABCD3P28288 AC004792.1-201ENST00000614523 137 ntBASIC0.59□□□□□ -2.31
ABCD3P28288 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
ABCD3P28288 RNU6-403P-201ENST00000363163 104 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 Y_RNA.120-201ENST00000363304 110 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 Y_RNA.272-201ENST00000364696 102 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 RNY1P13-201ENST00000365030 105 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 RNY1P4-201ENST00000384595 115 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 RNA5SP33-201ENST00000516687 98 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 RNU7-35P-201ENST00000517174 62 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 AC133485.4-201ENST00000561835 220 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 AC138907.4-201ENST00000570107 226 ntBASIC0.58□□□□□ -2.32
ABCD3P28288 MIR6082-201ENST00000613604 109 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms