Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
RPA1P27694 AL662814.1-201ENST00000617364 121 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU4-84P-201ENST00000364200 139 ntBASIC0.5□□□□□ -2.33
RPA1P27694 RNU6-309P-201ENST00000364573 106 ntBASIC0.5□□□□□ -2.33
RPA1P27694 Y_RNA.430-201ENST00000384081 110 ntBASIC0.5□□□□□ -2.33
RPA1P27694 SNORA18-201ENST00000384416 132 ntBASIC0.5□□□□□ -2.33
RPA1P27694 MIR125B2-201ENST00000385128 89 ntBASIC0.5□□□□□ -2.33
RPA1P27694 MT-TG-201ENST00000387429 68 ntBASIC0.5□□□□□ -2.33
RPA1P27694 Y_RNA.588-201ENST00000391254 102 ntBASIC0.5□□□□□ -2.33
RPA1P27694 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
RPA1P27694 RNU7-121P-201ENST00000516604 62 ntBASIC0.5□□□□□ -2.33
RPA1P27694 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
RPA1P27694 AC141846.1-201ENST00000568348 142 ntBASIC0.5□□□□□ -2.33
RPA1P27694 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
RPA1P27694 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
RPA1P27694 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
RPA1P27694 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
RPA1P27694 SNORA25.7-201ENST00000364375 127 ntBASIC0.49□□□□□ -2.33
RPA1P27694 Y_RNA.251-201ENST00000364551 99 ntBASIC0.49□□□□□ -2.33
RPA1P27694 RNU6-312P-201ENST00000364629 107 ntBASIC0.49□□□□□ -2.33
RPA1P27694 RNY1P13-201ENST00000365030 105 ntBASIC0.49□□□□□ -2.33
RPA1P27694 Y_RNA.355-201ENST00000365462 98 ntBASIC0.49□□□□□ -2.33
RPA1P27694 Y_RNA.401-201ENST00000383965 117 ntBASIC0.49□□□□□ -2.33
RPA1P27694 RNA5SP144-201ENST00000410846 116 ntBASIC0.49□□□□□ -2.33
RPA1P27694 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.49□□□□□ -2.33
RPA1P27694 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
RPA1P27694 RNU7-156P-201ENST00000517214 74 ntBASIC0.49□□□□□ -2.33
RPA1P27694 AC108081.1-201ENST00000604358 221 ntBASIC0.49□□□□□ -2.33
RPA1P27694 AC004792.1-201ENST00000614523 137 ntBASIC0.49□□□□□ -2.33
RPA1P27694 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
RPA1P27694 Y_RNA.240-201ENST00000364469 95 ntBASIC0.48□□□□□ -2.33
RPA1P27694 Y_RNA.476-201ENST00000384347 108 ntBASIC0.48□□□□□ -2.33
RPA1P27694 PCNPP3-201ENST00000393579 471 ntBASIC0.48□□□□□ -2.33
RPA1P27694 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
RPA1P27694 MIR18B-201ENST00000454574 71 ntBASIC0.48□□□□□ -2.33
RPA1P27694 RNU7-120P-201ENST00000459334 63 ntBASIC0.48□□□□□ -2.33
RPA1P27694 RNU6-240P-201ENST00000516098 97 ntBASIC0.48□□□□□ -2.33
RPA1P27694 SNORD92-201ENST00000585078 85 ntBASIC0.48□□□□□ -2.33
RPA1P27694 AL359881.1-201ENST00000602916 267 ntBASIC0.48□□□□□ -2.33
RPA1P27694 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.48□□□□□ -2.33
RPA1P27694 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.48□□□□□ -2.33
RPA1P27694 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
RPA1P27694 Y_RNA.13-201ENST00000362403 112 ntBASIC0.47□□□□□ -2.33
RPA1P27694 Y_RNA.42-201ENST00000362660 108 ntBASIC0.47□□□□□ -2.33
RPA1P27694 Y_RNA.257-201ENST00000364596 102 ntBASIC0.47□□□□□ -2.33
RPA1P27694 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
RPA1P27694 RNY1P6-201ENST00000384193 109 ntBASIC0.47□□□□□ -2.33
RPA1P27694 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
RPA1P27694 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
RPA1P27694 RNA5SP272-201ENST00000516095 111 ntBASIC0.47□□□□□ -2.33
RPA1P27694 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
RPA1P27694 MIR4491-201ENST00000581087 68 ntBASIC0.47□□□□□ -2.33
RPA1P27694 Y_RNA.150-201ENST00000363562 102 ntBASIC0.46□□□□□ -2.34
RPA1P27694 Y_RNA.366-201ENST00000365540 102 ntBASIC0.46□□□□□ -2.34
RPA1P27694 SNORA32-201ENST00000384072 121 ntBASIC0.46□□□□□ -2.34
RPA1P27694 RNU6-804P-201ENST00000384286 107 ntBASIC0.46□□□□□ -2.34
RPA1P27694 RNU6-239P-201ENST00000390990 99 ntBASIC0.46□□□□□ -2.34
RPA1P27694 SNORD93-201ENST00000408813 74 ntBASIC0.46□□□□□ -2.34
RPA1P27694 RNU7-197P-201ENST00000458836 62 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC107027.2-201ENST00000512197 115 ntBASIC0.46□□□□□ -2.34
RPA1P27694 SNORA25.16-201ENST00000516741 121 ntBASIC0.46□□□□□ -2.34
RPA1P27694 SNORA81.3-201ENST00000517283 198 ntBASIC0.46□□□□□ -2.34
RPA1P27694 IGKV1-22-201ENST00000524313 326 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC022523.2-201ENST00000561045 150 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC090897.1-201ENST00000580909 226 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC072026.1-201ENST00000605023 201 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC090425.1-201ENST00000610007 140 ntBASIC0.46□□□□□ -2.34
RPA1P27694 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.46□□□□□ -2.34
RPA1P27694 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
RPA1P27694 MIR6844-201ENST00000637122 62 ntBASIC0.46□□□□□ -2.34
RPA1P27694 Y_RNA.120-201ENST00000363304 110 ntBASIC0.45□□□□□ -2.34
RPA1P27694 Y_RNA.272-201ENST00000364696 102 ntBASIC0.45□□□□□ -2.34
RPA1P27694 Y_RNA.441-201ENST00000384123 112 ntBASIC0.45□□□□□ -2.34
RPA1P27694 Y_RNA.454-201ENST00000384224 113 ntBASIC0.45□□□□□ -2.34
RPA1P27694 Y_RNA.508-201ENST00000384502 114 ntBASIC0.45□□□□□ -2.34
RPA1P27694 RNU6-1104P-201ENST00000384723 104 ntBASIC0.45□□□□□ -2.34
RPA1P27694 RNU6-1307P-201ENST00000391012 103 ntBASIC0.45□□□□□ -2.34
RPA1P27694 RNU6-460P-201ENST00000391158 108 ntBASIC0.45□□□□□ -2.34
RPA1P27694 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
RPA1P27694 AC002350.1-201ENST00000490759 375 ntBASIC0.45□□□□□ -2.34
RPA1P27694 MTND5P34-201ENST00000568888 325 ntBASIC0.45□□□□□ -2.34
RPA1P27694 MIR548AE2-201ENST00000583456 67 ntBASIC0.45□□□□□ -2.34
RPA1P27694 MIR6515-201ENST00000619843 57 ntBASIC0.45□□□□□ -2.34
RPA1P27694 Y_RNA.294-201ENST00000364916 102 ntBASIC0.44□□□□□ -2.34
RPA1P27694 Y_RNA.337-201ENST00000365312 102 ntBASIC0.44□□□□□ -2.34
RPA1P27694 Y_RNA.515-201ENST00000384535 112 ntBASIC0.44□□□□□ -2.34
RPA1P27694 Y_RNA.552-201ENST00000384665 112 ntBASIC0.44□□□□□ -2.34
RPA1P27694 MIR644A-201ENST00000385262 94 ntBASIC0.44□□□□□ -2.34
RPA1P27694 MT-TF-201ENST00000387314 71 ntBASIC0.44□□□□□ -2.34
RPA1P27694 MT-TI-201ENST00000387365 69 ntBASIC0.44□□□□□ -2.34
RPA1P27694 SNORA75.5-201ENST00000391291 81 ntBASIC0.44□□□□□ -2.34
RPA1P27694 snoU13.18-201ENST00000459483 104 ntBASIC0.44□□□□□ -2.34
RPA1P27694 RNU7-123P-201ENST00000515911 60 ntBASIC0.44□□□□□ -2.34
RPA1P27694 RNU7-79P-201ENST00000516082 62 ntBASIC0.44□□□□□ -2.34
RPA1P27694 MTND5P41-201ENST00000517498 206 ntBASIC0.44□□□□□ -2.34
RPA1P27694 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
RPA1P27694 RNU6-403P-201ENST00000363163 104 ntBASIC0.43□□□□□ -2.34
RPA1P27694 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
RPA1P27694 RNU4-11P-201ENST00000365287 132 ntBASIC0.43□□□□□ -2.34
RPA1P27694 RNU6-949P-201ENST00000384040 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms