Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 RNU6-893P-201ENST00000458841 100 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.31□□□□□ -2.36
COL8A2P25067 SCARNA15-202ENST00000516881 127 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.31□□□□□ -2.36
COL8A2P25067 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 MIR4431-201ENST00000579990 94 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 AC009779.6-201ENST00000603972 165 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
COL8A2P25067 SNORA22.1-201ENST00000362701 134 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 RNU6-1237P-201ENST00000384777 107 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 AC107027.2-201ENST00000512197 115 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 MIR3612-201ENST00000579753 87 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 AL662814.1-201ENST00000617364 121 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 MIR6841-201ENST00000637129 72 ntBASIC0.3□□□□□ -2.36
COL8A2P25067 MTND5P32-201ENST00000560711 1802 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 RNU4-16P-201ENST00000364737 141 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
COL8A2P25067 RNU6-47P-201ENST00000383866 107 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 AC130289.1-201ENST00000577321 73 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 AC090897.1-201ENST00000580909 226 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 SNORD92-201ENST00000585078 85 ntBASIC0.29□□□□□ -2.36
COL8A2P25067 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.29□□□□□ -2.36
COL8A2P25067 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
COL8A2P25067 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 Y_RNA.52-201ENST00000362760 96 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 Y_RNA.188-201ENST00000363952 111 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 Y_RNA.233-201ENST00000364407 101 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 RNU6-312P-201ENST00000364629 107 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 Y_RNA.337-201ENST00000365312 102 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 Y_RNA.401-201ENST00000383965 117 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 RNY1P6-201ENST00000384193 109 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 RNU6-768P-201ENST00000384683 107 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 SNORD93-201ENST00000408813 74 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 RNU4-83P-201ENST00000410863 133 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
COL8A2P25067 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.274-201ENST00000364714 101 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.297-201ENST00000364950 91 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.357-201ENST00000365487 109 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 RNU6-1336P-201ENST00000383886 109 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 SNORA75.5-201ENST00000391291 81 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 SNORD100-201ENST00000408573 76 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.644-201ENST00000459006 113 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 RNU6-1219P-201ENST00000516143 112 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.674-201ENST00000516362 113 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 RNU6-1271P-201ENST00000517049 105 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 AC141846.1-201ENST00000568348 142 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 AC072026.1-201ENST00000605023 201 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 MIR8087-201ENST00000612745 78 ntBASIC0.27□□□□□ -2.37
COL8A2P25067 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
COL8A2P25067 Y_RNA.85-201ENST00000363014 111 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 RNU6-818P-201ENST00000364837 108 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 RNA5SP117-201ENST00000365294 118 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 SNORA18-201ENST00000384416 132 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 Y_RNA.552-201ENST00000384665 112 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 RNU5E-9P-201ENST00000411164 104 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 Y_RNA.793-201ENST00000411222 111 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 RN7SKP12-201ENST00000516275 143 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 RNU6-448P-201ENST00000517052 107 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 AC141273.2-201ENST00000618989 130 ntBASIC0.26□□□□□ -2.37
COL8A2P25067 Y_RNA.42-201ENST00000362660 108 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNU6-403P-201ENST00000363163 104 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNU6-1082P-201ENST00000364574 107 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNU6-949P-201ENST00000384040 107 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 MT-TG-201ENST00000387429 68 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 U8.15-201ENST00000390947 134 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 AL022718.1-201ENST00000412004 84 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 MTATP6P21-201ENST00000440681 189 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNU7-113P-201ENST00000459273 62 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 AC022559.1-201ENST00000520905 205 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 AP002392.1-201ENST00000537692 208 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 MIR3646-201ENST00000578301 84 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 Y_RNA.757-201ENST00000578934 114 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 MIR8066-201ENST00000617280 78 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 MIR6844-201ENST00000637122 62 ntBASIC0.25□□□□□ -2.37
COL8A2P25067 RNU6-349P-201ENST00000362402 107 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 Y_RNA.13-201ENST00000362403 112 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 Y_RNA.115-201ENST00000363272 98 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 Y_RNA.171-201ENST00000363760 102 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 RNU6-379P-201ENST00000363813 104 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 RNU6-690P-201ENST00000365242 106 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 SNORA72.6-201ENST00000384520 129 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 RNU6-239P-201ENST00000390990 99 ntBASIC0.24□□□□□ -2.37
COL8A2P25067 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms