Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 DEFB131E-201ENST00000532329 154 ntBASIC-0.34□□□□□ -2.46
USF1P22415 MIR5706-201ENST00000579841 80 ntBASIC-0.34□□□□□ -2.46
USF1P22415 U7.6-201ENST00000610841 64 ntBASIC-0.34□□□□□ -2.46
USF1P22415 SNORA18.1-201ENST00000363418 128 ntBASIC-0.35□□□□□ -2.47
USF1P22415 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.35□□□□□ -2.47
USF1P22415 RNU6-770P-201ENST00000363929 105 ntBASIC-0.35□□□□□ -2.47
USF1P22415 RNU6-726P-201ENST00000364680 107 ntBASIC-0.35□□□□□ -2.47
USF1P22415 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.35□□□□□ -2.47
USF1P22415 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.35□□□□□ -2.47
USF1P22415 MIR616-201ENST00000385293 97 ntBASIC-0.35□□□□□ -2.47
USF1P22415 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.35□□□□□ -2.47
USF1P22415 AL162376.1-201ENST00000624117 175 ntBASIC-0.35□□□□□ -2.47
USF1P22415 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
USF1P22415 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.36□□□□□ -2.47
USF1P22415 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.36□□□□□ -2.47
USF1P22415 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.36□□□□□ -2.47
USF1P22415 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.36□□□□□ -2.47
USF1P22415 RNU6-531P-201ENST00000516694 104 ntBASIC-0.36□□□□□ -2.47
USF1P22415 MIR3925-201ENST00000584674 77 ntBASIC-0.36□□□□□ -2.47
USF1P22415 AL365205.2-201ENST00000594586 68 ntBASIC-0.36□□□□□ -2.47
USF1P22415 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
USF1P22415 SNORA63.5-201ENST00000363548 123 ntBASIC-0.37□□□□□ -2.47
USF1P22415 RNA5SP368-201ENST00000364298 116 ntBASIC-0.37□□□□□ -2.47
USF1P22415 MIR548L-201ENST00000408303 86 ntBASIC-0.37□□□□□ -2.47
USF1P22415 SNORA79-201ENST00000408376 140 ntBASIC-0.37□□□□□ -2.47
USF1P22415 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.37□□□□□ -2.47
USF1P22415 SERF1AP1-201ENST00000514575 187 ntBASIC-0.37□□□□□ -2.47
USF1P22415 RNY3P15-201ENST00000516297 97 ntBASIC-0.37□□□□□ -2.47
USF1P22415 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.37□□□□□ -2.47
USF1P22415 MIR101-2-201ENST00000362195 79 ntBASIC-0.38□□□□□ -2.47
USF1P22415 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.38□□□□□ -2.47
USF1P22415 SNORD115-24-201ENST00000363528 82 ntBASIC-0.38□□□□□ -2.47
USF1P22415 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.38□□□□□ -2.47
USF1P22415 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.38□□□□□ -2.47
USF1P22415 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.38□□□□□ -2.47
USF1P22415 RPL21P38-201ENST00000418090 167 ntBASIC-0.38□□□□□ -2.47
USF1P22415 ELOCP20-201ENST00000422460 345 ntBASIC-0.38□□□□□ -2.47
USF1P22415 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.38□□□□□ -2.47
USF1P22415 snoU13.19-201ENST00000459148 104 ntBASIC-0.38□□□□□ -2.47
USF1P22415 RNU7-79P-201ENST00000516082 62 ntBASIC-0.38□□□□□ -2.47
USF1P22415 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.38□□□□□ -2.47
USF1P22415 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.38□□□□□ -2.47
USF1P22415 MIR4677-201ENST00000584153 80 ntBASIC-0.38□□□□□ -2.47
USF1P22415 uc_338.28-201ENST00000612082 187 ntBASIC-0.38□□□□□ -2.47
USF1P22415 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.38□□□□□ -2.47
USF1P22415 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.39□□□□□ -2.47
USF1P22415 RNA5SP133-201ENST00000363368 119 ntBASIC-0.39□□□□□ -2.47
USF1P22415 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
USF1P22415 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.39□□□□□ -2.47
USF1P22415 RNY4P3-201ENST00000365254 95 ntBASIC-0.39□□□□□ -2.47
USF1P22415 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
USF1P22415 RNU4-70P-201ENST00000384579 139 ntBASIC-0.39□□□□□ -2.47
USF1P22415 MTND4LP11-201ENST00000422184 280 ntBASIC-0.39□□□□□ -2.47
USF1P22415 AC244505.6-201ENST00000452829 130 ntBASIC-0.39□□□□□ -2.47
USF1P22415 MTND3P22-201ENST00000510932 243 ntBASIC-0.39□□□□□ -2.47
USF1P22415 RNU6-453P-201ENST00000516819 85 ntBASIC-0.39□□□□□ -2.47
USF1P22415 AC108676.2-201ENST00000605225 163 ntBASIC-0.39□□□□□ -2.47
USF1P22415 AL442067.1-201ENST00000613261 223 ntBASIC-0.39□□□□□ -2.47
USF1P22415 MTND5P32-201ENST00000560711 1802 ntBASIC-0.4□□□□□ -2.47
USF1P22415 MIR369-201ENST00000362155 70 ntBASIC-0.4□□□□□ -2.47
USF1P22415 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.4□□□□□ -2.47
USF1P22415 SNORA22B-201ENST00000383876 138 ntBASIC-0.4□□□□□ -2.47
USF1P22415 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
USF1P22415 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
USF1P22415 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.4□□□□□ -2.47
USF1P22415 MIR4795-201ENST00000584182 89 ntBASIC-0.4□□□□□ -2.47
USF1P22415 AC011921.3-201ENST00000605540 361 ntBASIC-0.4□□□□□ -2.47
USF1P22415 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU6-728P-201ENST00000365375 104 ntBASIC-0.41□□□□□ -2.48
USF1P22415 SNORD42.2-201ENST00000365570 69 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU7-35P-201ENST00000517174 62 ntBASIC-0.41□□□□□ -2.48
USF1P22415 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU7-161P-201ENST00000517289 62 ntBASIC-0.41□□□□□ -2.48
USF1P22415 RNU2-60P-201ENST00000517290 128 ntBASIC-0.41□□□□□ -2.48
USF1P22415 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.41□□□□□ -2.48
USF1P22415 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
USF1P22415 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.42□□□□□ -2.48
USF1P22415 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.42□□□□□ -2.48
USF1P22415 RNU6-702P-201ENST00000364982 107 ntBASIC-0.42□□□□□ -2.48
USF1P22415 MIR106A-201ENST00000384870 81 ntBASIC-0.42□□□□□ -2.48
USF1P22415 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
USF1P22415 MTND5P20-201ENST00000448677 143 ntBASIC-0.42□□□□□ -2.48
USF1P22415 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.42□□□□□ -2.48
USF1P22415 RNU6-570P-201ENST00000517051 105 ntBASIC-0.42□□□□□ -2.48
USF1P22415 CR383656.4-201ENST00000546909 122 ntBASIC-0.42□□□□□ -2.48
USF1P22415 AC138749.4-201ENST00000563970 127 ntBASIC-0.42□□□□□ -2.48
USF1P22415 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
USF1P22415 MIR6514-201ENST00000622549 70 ntBASIC-0.42□□□□□ -2.48
USF1P22415 U6.109-201ENST00000636749 87 ntBASIC-0.42□□□□□ -2.48
USF1P22415 AC073869.9-201ENST00000641610 120 ntBASIC-0.42□□□□□ -2.48
USF1P22415 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.43□□□□□ -2.48
USF1P22415 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.43□□□□□ -2.48
USF1P22415 SNORD114-15-201ENST00000364687 72 ntBASIC-0.43□□□□□ -2.48
USF1P22415 RNU4-16P-201ENST00000364737 141 ntBASIC-0.43□□□□□ -2.48
USF1P22415 RNU6-806P-201ENST00000365147 105 ntBASIC-0.43□□□□□ -2.48
USF1P22415 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.43□□□□□ -2.48
USF1P22415 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
USF1P22415 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms