Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
CDH3P22223 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
CDH3P22223 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
CDH3P22223 RNU6-1237P-201ENST00000384777 107 ntBASIC0.68□□□□□ -2.3
CDH3P22223 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
CDH3P22223 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
CDH3P22223 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
CDH3P22223 RNA5SP144-201ENST00000410846 116 ntBASIC0.68□□□□□ -2.3
CDH3P22223 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
CDH3P22223 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CDH3P22223 AC090425.1-201ENST00000610007 140 ntBASIC0.68□□□□□ -2.3
CDH3P22223 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
CDH3P22223 Y_RNA.171-201ENST00000363760 102 ntBASIC0.67□□□□□ -2.3
CDH3P22223 Y_RNA.251-201ENST00000364551 99 ntBASIC0.67□□□□□ -2.3
CDH3P22223 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
CDH3P22223 SNORD37.2-201ENST00000391075 66 ntBASIC0.67□□□□□ -2.3
CDH3P22223 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
CDH3P22223 MIR1257-201ENST00000408490 117 ntBASIC0.67□□□□□ -2.3
CDH3P22223 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
CDH3P22223 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CDH3P22223 MIR573-201ENST00000384964 99 ntBASIC0.66□□□□□ -2.3
CDH3P22223 PCNPP3-201ENST00000393579 471 ntBASIC0.66□□□□□ -2.3
CDH3P22223 MIR938-201ENST00000401216 83 ntBASIC0.66□□□□□ -2.3
CDH3P22223 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
CDH3P22223 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
CDH3P22223 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
CDH3P22223 RNU6-182P-201ENST00000516970 105 ntBASIC0.66□□□□□ -2.3
CDH3P22223 AC141846.1-201ENST00000568348 142 ntBASIC0.66□□□□□ -2.3
CDH3P22223 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
CDH3P22223 SNORA18-201ENST00000384416 132 ntBASIC0.65□□□□□ -2.31
CDH3P22223 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
CDH3P22223 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
CDH3P22223 AC008608.1-201ENST00000603910 127 ntBASIC0.65□□□□□ -2.31
CDH3P22223 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.65□□□□□ -2.31
CDH3P22223 FTX_2.1-201ENST00000618816 94 ntBASIC0.65□□□□□ -2.31
CDH3P22223 RNU6-690P-201ENST00000365242 106 ntBASIC0.64□□□□□ -2.31
CDH3P22223 RNU4-11P-201ENST00000365287 132 ntBASIC0.64□□□□□ -2.31
CDH3P22223 RNU6-1130P-201ENST00000365434 107 ntBASIC0.64□□□□□ -2.31
CDH3P22223 Y_RNA.470-201ENST00000384307 117 ntBASIC0.64□□□□□ -2.31
CDH3P22223 Y_RNA.584-201ENST00000391090 114 ntBASIC0.64□□□□□ -2.31
CDH3P22223 RNU6-394P-201ENST00000410735 107 ntBASIC0.64□□□□□ -2.31
CDH3P22223 AC096949.1-201ENST00000412047 152 ntBASIC0.64□□□□□ -2.31
CDH3P22223 MTATP6P21-201ENST00000440681 189 ntBASIC0.64□□□□□ -2.31
CDH3P22223 Y_RNA.651-201ENST00000459380 103 ntBASIC0.64□□□□□ -2.31
CDH3P22223 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
CDH3P22223 Y_RNA.686-201ENST00000516548 134 ntBASIC0.64□□□□□ -2.31
CDH3P22223 RNU6-794P-201ENST00000517261 64 ntBASIC0.64□□□□□ -2.31
CDH3P22223 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
CDH3P22223 AC112693.2-201ENST00000556538 232 ntBASIC0.64□□□□□ -2.31
CDH3P22223 SNORD92-201ENST00000585078 85 ntBASIC0.64□□□□□ -2.31
CDH3P22223 AC011603.4-201ENST00000611325 277 ntBASIC0.64□□□□□ -2.31
CDH3P22223 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDH3P22223 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDH3P22223 U8.15-201ENST00000390947 134 ntBASIC0.63□□□□□ -2.31
CDH3P22223 RNU7-197P-201ENST00000458836 62 ntBASIC0.63□□□□□ -2.31
CDH3P22223 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
CDH3P22223 RNU6-240P-201ENST00000516098 97 ntBASIC0.63□□□□□ -2.31
CDH3P22223 RNU7-156P-201ENST00000517214 74 ntBASIC0.63□□□□□ -2.31
CDH3P22223 Y_RNA.120-201ENST00000363304 110 ntBASIC0.62□□□□□ -2.31
CDH3P22223 Y_RNA.150-201ENST00000363562 102 ntBASIC0.62□□□□□ -2.31
CDH3P22223 RNU6-309P-201ENST00000364573 106 ntBASIC0.62□□□□□ -2.31
CDH3P22223 RNY1P13-201ENST00000365030 105 ntBASIC0.62□□□□□ -2.31
CDH3P22223 RNU6-364P-201ENST00000384387 107 ntBASIC0.62□□□□□ -2.31
CDH3P22223 Y_RNA.580-201ENST00000391004 95 ntBASIC0.62□□□□□ -2.31
CDH3P22223 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
CDH3P22223 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
CDH3P22223 RNU2-35P-201ENST00000516446 142 ntBASIC0.62□□□□□ -2.31
CDH3P22223 MIR4305-201ENST00000583252 102 ntBASIC0.62□□□□□ -2.31
CDH3P22223 Y_RNA.778-201ENST00000620203 90 ntBASIC0.62□□□□□ -2.31
CDH3P22223 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
CDH3P22223 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
CDH3P22223 SNORD115-2-201ENST00000362842 82 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-151P-201ENST00000364158 107 ntBASIC0.61□□□□□ -2.31
CDH3P22223 SNORD115-20-201ENST00000365099 82 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-449P-201ENST00000383914 107 ntBASIC0.61□□□□□ -2.31
CDH3P22223 SNORD116-18-201ENST00000383961 92 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-949P-201ENST00000384040 107 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-804P-201ENST00000384286 107 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-886P-201ENST00000384319 105 ntBASIC0.61□□□□□ -2.31
CDH3P22223 SNORD93-201ENST00000408813 74 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-447P-201ENST00000410293 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-1118P-201ENST00000410382 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-1076P-201ENST00000410397 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-355P-201ENST00000410427 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-791P-201ENST00000410467 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-705P-201ENST00000410601 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-1100P-201ENST00000410691 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-860P-201ENST00000410860 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-1086P-201ENST00000410930 100 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-1217P-201ENST00000411276 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU6-785P-201ENST00000411324 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 AL512326.2-201ENST00000426359 151 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNU7-113P-201ENST00000459273 62 ntBASIC0.61□□□□□ -2.31
CDH3P22223 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
CDH3P22223 MIR3612-201ENST00000579753 87 ntBASIC0.61□□□□□ -2.31
CDH3P22223 AC090897.1-201ENST00000580909 226 ntBASIC0.61□□□□□ -2.31
CDH3P22223 U6.90-201ENST00000614007 104 ntBASIC0.61□□□□□ -2.31
CDH3P22223 MIR8066-201ENST00000617280 78 ntBASIC0.61□□□□□ -2.31
CDH3P22223 U6.70-201ENST00000620287 104 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms