Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 RN7SKP19-201ENST00000516016 252 ntBASIC1.11□□□□□ -2.23
RXRAP19793 RNU6-781P-201ENST00000516377 101 ntBASIC1.11□□□□□ -2.23
RXRAP19793 IGKV1-22-201ENST00000524313 326 ntBASIC1.11□□□□□ -2.23
RXRAP19793 AC021443.1-201ENST00000604478 211 ntBASIC1.11□□□□□ -2.23
RXRAP19793 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.11□□□□□ -2.23
RXRAP19793 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RXRAP19793 SNORD58C-201ENST00000365223 64 ntBASIC1.1□□□□□ -2.23
RXRAP19793 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
RXRAP19793 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
RXRAP19793 Y_RNA.712-201ENST00000517011 92 ntBASIC1.1□□□□□ -2.23
RXRAP19793 MIR4264-201ENST00000583520 66 ntBASIC1.1□□□□□ -2.23
RXRAP19793 SNORA4-201ENST00000584302 138 ntBASIC1.1□□□□□ -2.23
RXRAP19793 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RXRAP19793 RNA5SP205-201ENST00000364653 136 ntBASIC1.09□□□□□ -2.23
RXRAP19793 SNORA26.6-201ENST00000391256 115 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR1263-201ENST00000408324 86 ntBASIC1.09□□□□□ -2.23
RXRAP19793 RNA5SP261-201ENST00000410536 106 ntBASIC1.09□□□□□ -2.23
RXRAP19793 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
RXRAP19793 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
RXRAP19793 RNU7-164P-201ENST00000459221 62 ntBASIC1.09□□□□□ -2.23
RXRAP19793 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR4698-201ENST00000577795 80 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR548AI-201ENST00000579940 88 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR4305-201ENST00000583252 102 ntBASIC1.09□□□□□ -2.23
RXRAP19793 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
RXRAP19793 MIR3914-2-201ENST00000637339 95 ntBASIC1.09□□□□□ -2.23
RXRAP19793 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
RXRAP19793 Y_RNA.466-201ENST00000384294 113 ntBASIC1.08□□□□□ -2.24
RXRAP19793 MIRLET7F2-201ENST00000385277 83 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNU6-1319P-201ENST00000390855 104 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNU6-747P-201ENST00000390928 104 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNU6-241P-201ENST00000391148 104 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNA5SP144-201ENST00000410846 116 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNU6-177P-201ENST00000411257 104 ntBASIC1.08□□□□□ -2.24
RXRAP19793 Y_RNA.630-201ENST00000411370 108 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNU7-123P-201ENST00000515911 60 ntBASIC1.08□□□□□ -2.24
RXRAP19793 RNY4P20-201ENST00000516678 93 ntBASIC1.08□□□□□ -2.24
RXRAP19793 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.08□□□□□ -2.24
RXRAP19793 AP000753.3-201ENST00000604083 169 ntBASIC1.08□□□□□ -2.24
RXRAP19793 AC025166.1-201ENST00000612411 163 ntBASIC1.08□□□□□ -2.24
RXRAP19793 MIR6717-201ENST00000622747 73 ntBASIC1.08□□□□□ -2.24
RXRAP19793 MIR6841-201ENST00000637129 72 ntBASIC1.08□□□□□ -2.24
RXRAP19793 SNORA22.1-201ENST00000362701 134 ntBASIC1.07□□□□□ -2.24
RXRAP19793 Y_RNA.298-201ENST00000364960 107 ntBASIC1.07□□□□□ -2.24
RXRAP19793 RNA5SP136-201ENST00000410906 107 ntBASIC1.07□□□□□ -2.24
RXRAP19793 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
RXRAP19793 AC244023.1-201ENST00000426884 112 ntBASIC1.07□□□□□ -2.24
RXRAP19793 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
RXRAP19793 RNU2-35P-201ENST00000516446 142 ntBASIC1.07□□□□□ -2.24
RXRAP19793 MIR3152-201ENST00000579801 74 ntBASIC1.07□□□□□ -2.24
RXRAP19793 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
RXRAP19793 AL359881.1-201ENST00000602916 267 ntBASIC1.07□□□□□ -2.24
RXRAP19793 AC242498.1-201ENST00000604134 111 ntBASIC1.07□□□□□ -2.24
RXRAP19793 U6.95-201ENST00000636931 70 ntBASIC1.07□□□□□ -2.24
RXRAP19793 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
RXRAP19793 Y_RNA.430-201ENST00000384081 110 ntBASIC1.06□□□□□ -2.24
RXRAP19793 Y_RNA.563-201ENST00000384707 108 ntBASIC1.06□□□□□ -2.24
RXRAP19793 AL022718.1-201ENST00000412004 84 ntBASIC1.06□□□□□ -2.24
RXRAP19793 RPS3AP1-201ENST00000413190 320 ntBASIC1.06□□□□□ -2.24
RXRAP19793 SNORD33.1-201ENST00000516213 88 ntBASIC1.06□□□□□ -2.24
RXRAP19793 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.06□□□□□ -2.24
RXRAP19793 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
RXRAP19793 Y_RNA.171-201ENST00000363760 102 ntBASIC1.05□□□□□ -2.24
RXRAP19793 Y_RNA.528-201ENST00000384575 108 ntBASIC1.05□□□□□ -2.24
RXRAP19793 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
RXRAP19793 SNORD38B-201ENST00000384690 67 ntBASIC1.05□□□□□ -2.24
RXRAP19793 MIR489-201ENST00000384923 84 ntBASIC1.05□□□□□ -2.24
RXRAP19793 MIR942-201ENST00000401111 86 ntBASIC1.05□□□□□ -2.24
RXRAP19793 RNA5SP95-201ENST00000410319 137 ntBASIC1.05□□□□□ -2.24
RXRAP19793 RNU6-893P-201ENST00000458841 100 ntBASIC1.05□□□□□ -2.24
RXRAP19793 AC022523.2-201ENST00000561045 150 ntBASIC1.05□□□□□ -2.24
RXRAP19793 SNORD38B-202ENST00000625943 69 ntBASIC1.05□□□□□ -2.24
RXRAP19793 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RXRAP19793 MTND5P18-201ENST00000445624 1801 ntBASIC1.05□□□□□ -2.24
RXRAP19793 Y_RNA.346-201ENST00000365385 112 ntBASIC1.04□□□□□ -2.24
RXRAP19793 SNORD114-22-201ENST00000365423 72 ntBASIC1.04□□□□□ -2.24
RXRAP19793 Y_RNA.353-201ENST00000365440 108 ntBASIC1.04□□□□□ -2.24
RXRAP19793 RNU6-602P-201ENST00000411155 105 ntBASIC1.04□□□□□ -2.24
RXRAP19793 AL512326.2-201ENST00000426359 151 ntBASIC1.04□□□□□ -2.24
RXRAP19793 RNU7-113P-201ENST00000459273 62 ntBASIC1.04□□□□□ -2.24
RXRAP19793 COX6CP6-201ENST00000490840 228 ntBASIC1.04□□□□□ -2.24
RXRAP19793 PDCD5P2-201ENST00000507570 312 ntBASIC1.04□□□□□ -2.24
RXRAP19793 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
RXRAP19793 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
RXRAP19793 RNU6-1290P-201ENST00000362957 109 ntBASIC1.03□□□□□ -2.24
RXRAP19793 Y_RNA.213-201ENST00000364178 111 ntBASIC1.03□□□□□ -2.24
RXRAP19793 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
RXRAP19793 RNU6-735P-201ENST00000410612 107 ntBASIC1.03□□□□□ -2.24
RXRAP19793 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
RXRAP19793 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
RXRAP19793 RNU6-1258P-201ENST00000516911 111 ntBASIC1.03□□□□□ -2.24
RXRAP19793 AC004812.1-201ENST00000540773 146 ntBASIC1.03□□□□□ -2.24
RXRAP19793 Y_RNA.198-201ENST00000364013 98 ntBASIC1.02□□□□□ -2.25
RXRAP19793 Y_RNA.273-201ENST00000364703 102 ntBASIC1.02□□□□□ -2.25
RXRAP19793 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
RXRAP19793 Y_RNA.354-201ENST00000365448 111 ntBASIC1.02□□□□□ -2.25
RXRAP19793 Y_RNA.531-201ENST00000384589 121 ntBASIC1.02□□□□□ -2.25
RXRAP19793 RNU6-1104P-201ENST00000384723 104 ntBASIC1.02□□□□□ -2.25
RXRAP19793 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 460 ms