Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORD115-20-201ENST00000365099 82 ntBASIC1.83□□□□□ -2.12
ERCC3P19447 RNU6-1165P-201ENST00000410119 107 ntBASIC1.83□□□□□ -2.12
ERCC3P19447 SNORA25.8-201ENST00000364831 128 ntBASIC1.82□□□□□ -2.12
ERCC3P19447 MT-TI-201ENST00000387365 69 ntBASIC1.82□□□□□ -2.12
ERCC3P19447 RNU7-79P-201ENST00000516082 62 ntBASIC1.82□□□□□ -2.12
ERCC3P19447 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
ERCC3P19447 RNY4P6-201ENST00000363667 96 ntBASIC1.81□□□□□ -2.12
ERCC3P19447 RNU6-735P-201ENST00000410612 107 ntBASIC1.81□□□□□ -2.12
ERCC3P19447 RNU7-40P-201ENST00000516397 64 ntBASIC1.81□□□□□ -2.12
ERCC3P19447 AL589743.1-201ENST00000551932 2712 ntBASIC1.8□□□□□ -2.12
ERCC3P19447 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
ERCC3P19447 AC036111.3-201ENST00000526389 112 ntBASIC1.8□□□□□ -2.12
ERCC3P19447 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
ERCC3P19447 AL662814.1-201ENST00000617364 121 ntBASIC1.8□□□□□ -2.12
ERCC3P19447 MIR377-201ENST00000362145 69 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 RNU6-1290P-201ENST00000362957 109 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 Y_RNA.168-201ENST00000363740 102 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 RNU6-1056P-201ENST00000383996 107 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 MIR1323-201ENST00000408090 73 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 SNORD111-201ENST00000408139 94 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 RNU6-1064P-201ENST00000410626 104 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 AC063976.4-201ENST00000421971 163 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 AC141846.1-201ENST00000568348 142 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 RNU6-94P-201ENST00000607728 107 ntBASIC1.79□□□□□ -2.12
ERCC3P19447 Y_RNA.327-201ENST00000365201 102 ntBASIC1.78□□□□□ -2.12
ERCC3P19447 MIR499A-201ENST00000384903 122 ntBASIC1.78□□□□□ -2.12
ERCC3P19447 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ERCC3P19447 SNORD83.1-201ENST00000411362 77 ntBASIC1.78□□□□□ -2.12
ERCC3P19447 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.78□□□□□ -2.12
ERCC3P19447 AC012676.2-201ENST00000619258 186 ntBASIC1.78□□□□□ -2.12
ERCC3P19447 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
ERCC3P19447 Y_RNA.353-201ENST00000365440 108 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 SNORD26-201ENST00000384147 75 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 RNU6-476P-201ENST00000384726 107 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 snoU13.21-201ENST00000459368 105 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 AC007012.1-201ENST00000567192 175 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 uc_338.6-201ENST00000613544 171 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 AC106800.4-201ENST00000614905 153 ntBASIC1.77□□□□□ -2.13
ERCC3P19447 SNORA25.9-201ENST00000365087 128 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 RNU6-934P-201ENST00000365154 107 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 SNORD116-21-201ENST00000384507 92 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 Y_RNA.563-201ENST00000384707 108 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 MIR548D2-201ENST00000384955 97 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 RNU6-955P-201ENST00000410497 104 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 AC002429.1-201ENST00000437672 148 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.76□□□□□ -2.13
ERCC3P19447 AC067940.1-201ENST00000458411 300 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 RNU7-35P-201ENST00000517174 62 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 SNORA4-201ENST00000584302 138 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 FAM71BP1-201ENST00000604431 523 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.76□□□□□ -2.13
ERCC3P19447 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ERCC3P19447 SNORA63.5-201ENST00000363548 123 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 SNORD12-201ENST00000391002 90 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 AC015818.7-201ENST00000428754 109 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 AC087499.7-201ENST00000441958 109 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 SNORA31.24-201ENST00000517232 57 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 MIR6129-201ENST00000616087 109 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 AC105081.1-201ENST00000617727 106 ntBASIC1.75□□□□□ -2.13
ERCC3P19447 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 AL391516.1-201ENST00000554380 2449 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 RNU6-392P-201ENST00000364926 101 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 RNU6-616P-201ENST00000384353 107 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC3P19447 SNORD67.1-201ENST00000516618 108 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 MIR4771-2-201ENST00000577758 74 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 MIR4771-1-201ENST00000582617 74 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 MIR7111-201ENST00000619751 72 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 AC023934.1-201ENST00000574529 2389 ntBASIC1.74□□□□□ -2.13
ERCC3P19447 RNY1P13-201ENST00000365030 105 ntBASIC1.73□□□□□ -2.13
ERCC3P19447 RNU6-1144P-201ENST00000384247 104 ntBASIC1.73□□□□□ -2.13
ERCC3P19447 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.73□□□□□ -2.13
ERCC3P19447 AC087741.2-201ENST00000619415 172 ntBASIC1.73□□□□□ -2.13
ERCC3P19447 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ERCC3P19447 RNU6-580P-201ENST00000365159 107 ntBASIC1.72□□□□□ -2.13
ERCC3P19447 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
ERCC3P19447 SNORD93-201ENST00000408813 74 ntBASIC1.72□□□□□ -2.13
ERCC3P19447 Y_RNA.273-201ENST00000364703 102 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 Y_RNA.362-201ENST00000365518 110 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 MIR563-201ENST00000385080 79 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 MIR100-201ENST00000385259 80 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 MIR18B-201ENST00000454574 71 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 AC027335.2-201ENST00000624030 375 ntBASIC1.71□□□□□ -2.14
ERCC3P19447 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ERCC3P19447 MIR30D-201ENST00000362283 70 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 Y_RNA.35-201ENST00000362601 101 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 Y_RNA.344-201ENST00000365381 112 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 RNU6-949P-201ENST00000384040 107 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 RNU6-880P-201ENST00000384526 107 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 MIR150-201ENST00000385048 84 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 MIR1257-201ENST00000408490 117 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 Y_RNA.629-201ENST00000411368 105 ntBASIC1.7□□□□□ -2.14
ERCC3P19447 MIR1270-201ENST00000459320 83 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms