Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU7-193P-201ENST00000516723 65 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXD8P13378 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
HOXD8P13378 RNU6-1163P-201ENST00000364516 107 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-203P-201ENST00000384038 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-1321P-201ENST00000390905 107 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-447P-201ENST00000410293 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-1118P-201ENST00000410382 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-1076P-201ENST00000410397 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-355P-201ENST00000410427 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-791P-201ENST00000410467 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-705P-201ENST00000410601 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 Y_RNA.609-201ENST00000410669 89 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-1100P-201ENST00000410691 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-860P-201ENST00000410860 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-1217P-201ENST00000411276 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU6-785P-201ENST00000411324 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU7-48P-201ENST00000458875 63 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 RNU7-137P-201ENST00000516788 62 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXD8P13378 MIR4781-201ENST00000585250 76 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 U6.90-201ENST00000614007 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 U6.70-201ENST00000620287 104 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 AC006160.2-201ENST00000637708 154 ntBASIC2.4□□□□□ -2.03
HOXD8P13378 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXD8P13378 Y_RNA.98-201ENST00000363109 102 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 Y_RNA.118-201ENST00000363300 101 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 RNU6-1125P-201ENST00000363601 107 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 Y_RNA.355-201ENST00000365462 98 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 RNU6-1053P-201ENST00000515930 101 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 AC133485.1-201ENST00000567176 124 ntBASIC2.39□□□□□ -2.03
HOXD8P13378 RNU6-633P-201ENST00000362612 103 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 RNU6-509P-201ENST00000363519 107 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 Y_RNA.191-201ENST00000363972 113 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 AC004965.1-201ENST00000413033 213 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HOXD8P13378 RPL23AP42-201ENST00000471152 471 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 RNU7-41P-201ENST00000515917 61 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXD8P13378 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXD8P13378 SEPT14P17-201ENST00000617978 177 ntBASIC2.38□□□□□ -2.03
HOXD8P13378 RNA5SP48-201ENST00000363969 126 ntBASIC2.37□□□□□ -2.03
HOXD8P13378 MIR513A1-201ENST00000385138 129 ntBASIC2.37□□□□□ -2.03
HOXD8P13378 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
HOXD8P13378 RNU1-98P-201ENST00000458992 160 ntBASIC2.37□□□□□ -2.03
HOXD8P13378 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXD8P13378 AP001362.1-201ENST00000625165 124 ntBASIC2.37□□□□□ -2.03
HOXD8P13378 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXD8P13378 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXD8P13378 RNU6-1244P-201ENST00000363614 108 ntBASIC2.36□□□□□ -2.03
HOXD8P13378 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
HOXD8P13378 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
HOXD8P13378 AC012676.2-201ENST00000619258 186 ntBASIC2.36□□□□□ -2.03
HOXD8P13378 MIR548BB-201ENST00000626714 66 ntBASIC2.36□□□□□ -2.03
HOXD8P13378 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HOXD8P13378 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXD8P13378 AC009474.2-201ENST00000451383 136 ntBASIC2.35□□□□□ -2.03
HOXD8P13378 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
HOXD8P13378 RNU6-922P-201ENST00000516753 99 ntBASIC2.35□□□□□ -2.03
HOXD8P13378 RNA5SP276-201ENST00000362580 94 ntBASIC2.34□□□□□ -2.03
HOXD8P13378 RNU6-652P-201ENST00000365488 107 ntBASIC2.34□□□□□ -2.03
HOXD8P13378 AL161932.1-201ENST00000437408 146 ntBASIC2.34□□□□□ -2.03
HOXD8P13378 AC141846.1-201ENST00000568348 142 ntBASIC2.34□□□□□ -2.03
HOXD8P13378 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXD8P13378 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HOXD8P13378 RNY1P13-201ENST00000365030 105 ntBASIC2.33□□□□□ -2.04
HOXD8P13378 RNU6-480P-201ENST00000384332 107 ntBASIC2.33□□□□□ -2.04
HOXD8P13378 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.33□□□□□ -2.04
HOXD8P13378 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXD8P13378 Y_RNA.168-201ENST00000363740 102 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 RNU2-19P-201ENST00000517288 84 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXD8P13378 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
HOXD8P13378 RNU1-17P-201ENST00000363022 152 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 Y_RNA.316-201ENST00000365118 111 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 MIR653-201ENST00000385279 96 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXD8P13378 AC245517.4-201ENST00000448601 281 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 RPS29P11-201ENST00000496507 171 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HOXD8P13378 AL662814.1-201ENST00000617364 121 ntBASIC2.31□□□□□ -2.04
HOXD8P13378 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXD8P13378 MIR489-201ENST00000384923 84 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 JTBP1-201ENST00000441314 247 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 RNU6-947P-201ENST00000516264 106 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 RNU6-295P-201ENST00000516901 104 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 AL357312.1-201ENST00000603879 298 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.3□□□□□ -2.04
HOXD8P13378 SNORD115-37-201ENST00000363768 82 ntBASIC2.29□□□□□ -2.04
HOXD8P13378 RNU6-439P-201ENST00000384188 106 ntBASIC2.29□□□□□ -2.04
HOXD8P13378 MIR181B2-201ENST00000385004 89 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms