Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD12C-201ENST00000386307 89 ntBASIC1.57□□□□□ -2.16
SNRPA1P09661 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
SNRPA1P09661 PRELID3BP2-201ENST00000605362 201 ntBASIC1.57□□□□□ -2.16
SNRPA1P09661 MIR96-201ENST00000362288 78 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 SNORD115-2-201ENST00000362842 82 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 SNORD115-20-201ENST00000365099 82 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 RNU6-342P-201ENST00000384521 104 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.56□□□□□ -2.16
SNRPA1P09661 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
SNRPA1P09661 Y_RNA.191-201ENST00000363972 113 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 Y_RNA.354-201ENST00000365448 111 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 Y_RNA.355-201ENST00000365462 98 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SNRPA1P09661 MIR1270-201ENST00000459320 83 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 AL133373.1-201ENST00000497098 94 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.55□□□□□ -2.16
SNRPA1P09661 AC087741.2-201ENST00000619415 172 ntBASIC1.55□□□□□ -2.16
SNRPA1P09661 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 MIR103A2-201ENST00000362154 78 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 Y_RNA.281-201ENST00000364774 94 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 SNORA18-201ENST00000384416 132 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 RNU6-1237P-201ENST00000384777 107 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 MIR1185-1-201ENST00000408598 86 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 AP003716.2-201ENST00000528260 108 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 MIR4452-201ENST00000583004 71 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
SNRPA1P09661 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SNRPA1P09661 Y_RNA.85-201ENST00000363014 111 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 RNA5SP264-201ENST00000363115 107 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 Y_RNA.299-201ENST00000364973 94 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 SNORD114-22-201ENST00000365423 72 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 Y_RNA.508-201ENST00000384502 114 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 MIR518E-201ENST00000385252 88 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
SNRPA1P09661 MTATP6P29-201ENST00000415057 132 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 AC244023.1-201ENST00000426884 112 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 MIR4679-2-201ENST00000578358 77 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 AC242498.1-201ENST00000604134 111 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 Y_RNA.773-201ENST00000607168 90 ntBASIC1.53□□□□□ -2.16
SNRPA1P09661 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.17
SNRPA1P09661 RNU6-1107P-201ENST00000364817 104 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 RNU6-396P-201ENST00000365369 105 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 AC048334.1-201ENST00000477975 159 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 PDCD5P2-201ENST00000507570 312 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 RNU6-412P-201ENST00000516434 106 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 MIR1255B1-201ENST00000636325 63 ntBASIC1.52□□□□□ -2.17
SNRPA1P09661 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
SNRPA1P09661 RNU6-205P-201ENST00000390858 107 ntBASIC1.51□□□□□ -2.17
SNRPA1P09661 RNA5SP95-201ENST00000410319 137 ntBASIC1.51□□□□□ -2.17
SNRPA1P09661 uc_338.28-201ENST00000612082 187 ntBASIC1.51□□□□□ -2.17
SNRPA1P09661 MIR6516-201ENST00000630554 81 ntBASIC1.51□□□□□ -2.17
SNRPA1P09661 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNRPA1P09661 RNU6-616P-201ENST00000384353 107 ntBASIC1.5□□□□□ -2.17
SNRPA1P09661 SNORD77B-201ENST00000391112 67 ntBASIC1.5□□□□□ -2.17
SNRPA1P09661 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNRPA1P09661 SNORD115-19-201ENST00000363098 82 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 SNORD115-18-201ENST00000363293 82 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 SNORD115-17-201ENST00000364612 82 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 RNU1-93P-201ENST00000364704 169 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 RNU6-1086P-201ENST00000410930 100 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRPA1P09661 MIR7111-201ENST00000619751 72 ntBASIC1.49□□□□□ -2.17
SNRPA1P09661 RNU6-755P-201ENST00000364400 103 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RNU6-153P-201ENST00000364422 104 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 U8.6-201ENST00000364939 135 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 MIR588-201ENST00000384900 83 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RNU6-816P-201ENST00000390914 107 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RNU6-1268P-201ENST00000391214 107 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RNU6-1239P-201ENST00000391310 107 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RPL39P34-201ENST00000477141 156 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 RNU7-35P-201ENST00000517174 62 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 AC068339.1-201ENST00000526965 141 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 AP000753.3-201ENST00000604083 169 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 MIR6740-201ENST00000618268 113 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 AL162726.3-218ENST00000636401 95 ntBASIC1.48□□□□□ -2.17
SNRPA1P09661 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
SNRPA1P09661 Y_RNA.49-201ENST00000362714 112 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RNU6-1014P-201ENST00000383940 103 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RNA5SP237-201ENST00000410414 113 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RNU6-554P-201ENST00000410466 106 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RNU6-1054P-201ENST00000411293 104 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RPL39P25-201ENST00000449384 154 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 snoU13.2-201ENST00000459201 104 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 RNU7-79P-201ENST00000516082 62 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 MIR5009-201ENST00000578736 100 ntBASIC1.47□□□□□ -2.17
SNRPA1P09661 MIR4264-201ENST00000583520 66 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms