Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.470-201ENST00000384307 117 ntBASIC1.1□□□□□ -2.23
MMP3P08254 AL603908.1-201ENST00000406098 201 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNA5SP261-201ENST00000410536 106 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNU7-123P-201ENST00000515911 60 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNU11-2P-201ENST00000516898 142 ntBASIC1.1□□□□□ -2.23
MMP3P08254 MIR4264-201ENST00000583520 66 ntBASIC1.1□□□□□ -2.23
MMP3P08254 AL137067.1-201ENST00000615933 120 ntBASIC1.1□□□□□ -2.23
MMP3P08254 RNU6-704P-201ENST00000364162 103 ntBASIC1.09□□□□□ -2.23
MMP3P08254 Y_RNA.525-201ENST00000384570 113 ntBASIC1.09□□□□□ -2.23
MMP3P08254 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
MMP3P08254 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
MMP3P08254 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
MMP3P08254 RNY4P20-201ENST00000516678 93 ntBASIC1.09□□□□□ -2.23
MMP3P08254 AC022523.2-201ENST00000561045 150 ntBASIC1.09□□□□□ -2.23
MMP3P08254 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
MMP3P08254 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
MMP3P08254 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
MMP3P08254 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.09□□□□□ -2.23
MMP3P08254 SNORA32-201ENST00000384072 121 ntBASIC1.08□□□□□ -2.24
MMP3P08254 Y_RNA.430-201ENST00000384081 110 ntBASIC1.08□□□□□ -2.24
MMP3P08254 SNORD83.1-201ENST00000411362 77 ntBASIC1.08□□□□□ -2.24
MMP3P08254 AL022718.1-201ENST00000412004 84 ntBASIC1.08□□□□□ -2.24
MMP3P08254 RNU7-113P-201ENST00000459273 62 ntBASIC1.08□□□□□ -2.24
MMP3P08254 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
MMP3P08254 RNU6-781P-201ENST00000516377 101 ntBASIC1.08□□□□□ -2.24
MMP3P08254 RNU6-1234P-201ENST00000516877 103 ntBASIC1.08□□□□□ -2.24
MMP3P08254 Y_RNA.280-201ENST00000364765 112 ntBASIC1.07□□□□□ -2.24
MMP3P08254 SNORA18-201ENST00000384416 132 ntBASIC1.07□□□□□ -2.24
MMP3P08254 MT-TN-201ENST00000387400 73 ntBASIC1.07□□□□□ -2.24
MMP3P08254 AL158147.1-201ENST00000443970 75 ntBASIC1.07□□□□□ -2.24
MMP3P08254 RNU7-107P-201ENST00000459121 61 ntBASIC1.07□□□□□ -2.24
MMP3P08254 AC113410.1-201ENST00000505029 247 ntBASIC1.07□□□□□ -2.24
MMP3P08254 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
MMP3P08254 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
MMP3P08254 TUG1_4.1-201ENST00000619464 181 ntBASIC1.07□□□□□ -2.24
MMP3P08254 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
MMP3P08254 SNORD113.3-201ENST00000364630 78 ntBASIC1.06□□□□□ -2.24
MMP3P08254 Y_RNA.298-201ENST00000364960 107 ntBASIC1.06□□□□□ -2.24
MMP3P08254 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
MMP3P08254 MIR1263-201ENST00000408324 86 ntBASIC1.06□□□□□ -2.24
MMP3P08254 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
MMP3P08254 snoU13.2-201ENST00000459201 104 ntBASIC1.06□□□□□ -2.24
MMP3P08254 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
MMP3P08254 RN7SKP19-201ENST00000516016 252 ntBASIC1.06□□□□□ -2.24
MMP3P08254 RNU6-1061P-201ENST00000516530 99 ntBASIC1.06□□□□□ -2.24
MMP3P08254 AC004812.1-201ENST00000540773 146 ntBASIC1.06□□□□□ -2.24
MMP3P08254 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
MMP3P08254 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
MMP3P08254 MIR377-201ENST00000362145 69 ntBASIC1.05□□□□□ -2.24
MMP3P08254 Y_RNA.205-201ENST00000364128 113 ntBASIC1.05□□□□□ -2.24
MMP3P08254 Y_RNA.218-201ENST00000364218 104 ntBASIC1.05□□□□□ -2.24
MMP3P08254 RNU6-1104P-201ENST00000384723 104 ntBASIC1.05□□□□□ -2.24
MMP3P08254 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
MMP3P08254 RNA5SP237-201ENST00000410414 113 ntBASIC1.05□□□□□ -2.24
MMP3P08254 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
MMP3P08254 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.05□□□□□ -2.24
MMP3P08254 RNA5SP33-201ENST00000516687 98 ntBASIC1.05□□□□□ -2.24
MMP3P08254 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
MMP3P08254 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
MMP3P08254 MIR548AE2-201ENST00000583456 67 ntBASIC1.05□□□□□ -2.24
MMP3P08254 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
MMP3P08254 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
MMP3P08254 RNU6-647P-201ENST00000364243 107 ntBASIC1.04□□□□□ -2.24
MMP3P08254 SNORD50.2-201ENST00000365465 70 ntBASIC1.04□□□□□ -2.24
MMP3P08254 Y_RNA.531-201ENST00000384589 121 ntBASIC1.04□□□□□ -2.24
MMP3P08254 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
MMP3P08254 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
MMP3P08254 TMSB4XP3-201ENST00000445144 114 ntBASIC1.03□□□□□ -2.24
MMP3P08254 RNU6-772P-201ENST00000516042 105 ntBASIC1.03□□□□□ -2.24
MMP3P08254 MIR4771-2-201ENST00000577758 74 ntBASIC1.03□□□□□ -2.24
MMP3P08254 MIR4771-1-201ENST00000582617 74 ntBASIC1.03□□□□□ -2.24
MMP3P08254 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
MMP3P08254 AL589743.1-201ENST00000551932 2712 ntBASIC1.03□□□□□ -2.24
MMP3P08254 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
MMP3P08254 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
MMP3P08254 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
MMP3P08254 MT-TI-201ENST00000387365 69 ntBASIC1.02□□□□□ -2.25
MMP3P08254 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
MMP3P08254 MIR942-201ENST00000401111 86 ntBASIC1.02□□□□□ -2.25
MMP3P08254 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
MMP3P08254 Y_RNA.630-201ENST00000411370 108 ntBASIC1.02□□□□□ -2.25
MMP3P08254 RNU6-893P-201ENST00000458841 100 ntBASIC1.02□□□□□ -2.25
MMP3P08254 AC141846.1-201ENST00000568348 142 ntBASIC1.02□□□□□ -2.25
MMP3P08254 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
MMP3P08254 AL662814.1-201ENST00000617364 121 ntBASIC1.02□□□□□ -2.25
MMP3P08254 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
MMP3P08254 MIR30D-201ENST00000362283 70 ntBASIC1.01□□□□□ -2.25
MMP3P08254 RNU6-934P-201ENST00000365154 107 ntBASIC1.01□□□□□ -2.25
MMP3P08254 MIR539-201ENST00000365690 78 ntBASIC1.01□□□□□ -2.25
MMP3P08254 MIR563-201ENST00000385080 79 ntBASIC1.01□□□□□ -2.25
MMP3P08254 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.01□□□□□ -2.25
MMP3P08254 Y_RNA.617-201ENST00000410920 90 ntBASIC1.01□□□□□ -2.25
MMP3P08254 MIR1270-201ENST00000459320 83 ntBASIC1.01□□□□□ -2.25
MMP3P08254 RN7SL793P-201ENST00000583259 296 ntBASIC1.01□□□□□ -2.25
MMP3P08254 Y_RNA.71-201ENST00000362892 104 ntBASIC1□□□□□ -2.25
MMP3P08254 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
MMP3P08254 SNORD58C-201ENST00000365223 64 ntBASIC1□□□□□ -2.25
MMP3P08254 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms