Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR7974-201ENST00000615835 79 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 RNU6-363P-201ENST00000362895 105 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 Y_RNA.338-201ENST00000365320 114 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 Y_RNA.348-201ENST00000365403 103 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 Y_RNA.507-201ENST00000384500 99 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 RNU6-109P-201ENST00000516364 107 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 RNU6-184P-201ENST00000516514 107 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 AL512598.1-201ENST00000610158 273 ntBASIC1.57□□□□□ -2.16
CDKL5O76039 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 Y_RNA.155-201ENST00000363632 101 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 Y_RNA.354-201ENST00000365448 111 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 RNU6-905P-201ENST00000384434 107 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 MIR150-201ENST00000385048 84 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 MIR605-201ENST00000385078 83 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 AP001318.4-201ENST00000616637 121 ntBASIC1.56□□□□□ -2.16
CDKL5O76039 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
CDKL5O76039 RNU6-640P-201ENST00000363693 105 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 Y_RNA.360-201ENST00000365512 102 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU6-409P-201ENST00000384114 104 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU6-1113P-201ENST00000384348 107 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 SNORD38B-201ENST00000384690 67 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU6-679P-201ENST00000391003 106 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 SNORA7.5-201ENST00000410672 110 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU6-733P-201ENST00000410759 104 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU6-904P-201ENST00000516206 101 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 RNU7-35P-201ENST00000517174 62 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 PRELID3BP2-201ENST00000605362 201 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 SNORD38B-202ENST00000625943 69 ntBASIC1.55□□□□□ -2.16
CDKL5O76039 Y_RNA.78-201ENST00000362970 110 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 RNU6-1237P-201ENST00000384777 107 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 MIR577-201ENST00000385196 96 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 RNU4-62P-201ENST00000410125 130 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL5O76039 BTF3P4-201ENST00000418852 495 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 AC244023.1-201ENST00000426884 112 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 AC108729.3-201ENST00000513484 108 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 AC242498.1-201ENST00000604134 111 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 FAM71BP1-201ENST00000604431 523 ntBASIC1.54□□□□□ -2.16
CDKL5O76039 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CDKL5O76039 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDKL5O76039 Y_RNA.43-201ENST00000362670 111 ntBASIC1.53□□□□□ -2.16
CDKL5O76039 RNU6-1099P-201ENST00000363533 107 ntBASIC1.53□□□□□ -2.16
CDKL5O76039 RNU6-1307P-201ENST00000391012 103 ntBASIC1.53□□□□□ -2.16
CDKL5O76039 RNU6-521P-201ENST00000516663 105 ntBASIC1.53□□□□□ -2.16
CDKL5O76039 MIR4694-201ENST00000578534 80 ntBASIC1.53□□□□□ -2.16
CDKL5O76039 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CDKL5O76039 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDKL5O76039 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
CDKL5O76039 Y_RNA.544-201ENST00000384650 113 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 MIR206-201ENST00000384872 86 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 RNU6-1086P-201ENST00000410930 100 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 RPL39P39-201ENST00000455840 151 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 SNORD67.1-201ENST00000516618 108 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 DEFB131E-201ENST00000532329 154 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.52□□□□□ -2.17
CDKL5O76039 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
CDKL5O76039 RNY3P2-201ENST00000362918 102 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 RNU6-1255P-201ENST00000363434 112 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 MIR1185-1-201ENST00000408598 86 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 RNU7-79P-201ENST00000516082 62 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 Y_RNA.694-201ENST00000516677 117 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 Y_RNA.818-201ENST00000618813 71 ntBASIC1.51□□□□□ -2.17
CDKL5O76039 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CDKL5O76039 RNU6-832P-201ENST00000363319 107 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 RNU4-36P-201ENST00000364294 144 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 SNORD115-35-201ENST00000365122 82 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 RNY4P30-201ENST00000410216 95 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 RNU7-2P-201ENST00000516096 62 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 SNORA40.13-201ENST00000516379 120 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 snoU13.31-201ENST00000607291 104 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 AL662814.1-201ENST00000617364 121 ntBASIC1.5□□□□□ -2.17
CDKL5O76039 RNY1P13-201ENST00000365030 105 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 RNU6-396P-201ENST00000365369 105 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 RNU6-1201P-201ENST00000384227 107 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 AP1B1P2-201ENST00000416196 106 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 snoU13.2-201ENST00000459201 104 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 AL133373.1-201ENST00000497098 94 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 RNU7-137P-201ENST00000516788 62 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 AL512310.8-201ENST00000550183 120 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 AC141846.1-201ENST00000568348 142 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms