Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.629-201ENST00000411368 105 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 AC022523.2-201ENST00000561045 150 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 AL359881.1-201ENST00000602916 267 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 SEPT14P17-201ENST00000617978 177 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 Y_RNA.299-201ENST00000364973 94 ntBASIC1.39□□□□□ -2.19
VPS4BO75351 MIR563-201ENST00000385080 79 ntBASIC1.39□□□□□ -2.19
VPS4BO75351 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
VPS4BO75351 SNORD33.1-201ENST00000516213 88 ntBASIC1.39□□□□□ -2.19
VPS4BO75351 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
VPS4BO75351 Y_RNA.213-201ENST00000364178 111 ntBASIC1.38□□□□□ -2.19
VPS4BO75351 SNORD12C-201ENST00000386307 89 ntBASIC1.38□□□□□ -2.19
VPS4BO75351 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
VPS4BO75351 snoU13.2-201ENST00000459201 104 ntBASIC1.38□□□□□ -2.19
VPS4BO75351 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 AL670379.3-201ENST00000605040 251 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 MIR6515-201ENST00000619843 57 ntBASIC1.37□□□□□ -2.19
VPS4BO75351 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU6-654P-201ENST00000364373 107 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU6-1144P-201ENST00000384247 104 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU6-735P-201ENST00000410612 107 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU4-69P-201ENST00000410677 143 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 MIR1270-201ENST00000459320 83 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNA5SP33-201ENST00000516687 98 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 RNU7-35P-201ENST00000517174 62 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 MIR4679-2-201ENST00000578358 77 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 MIR3163-201ENST00000581592 73 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 MIR548AE2-201ENST00000583456 67 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 AP000753.3-201ENST00000604083 169 ntBASIC1.36□□□□□ -2.19
VPS4BO75351 SNORD114-26-201ENST00000363543 72 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 Y_RNA.168-201ENST00000363740 102 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 SNORA80D-201ENST00000384488 135 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 RNU6-342P-201ENST00000384521 104 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 RNU6-476P-201ENST00000384726 107 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 RNU6-1064P-201ENST00000410626 104 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 RNU6-1086P-201ENST00000410930 100 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 Y_RNA.649-201ENST00000459077 103 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 MIR6740-201ENST00000618268 113 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 AC087741.2-201ENST00000619415 172 ntBASIC1.35□□□□□ -2.19
VPS4BO75351 SNORD115-19-201ENST00000363098 82 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 SNORD115-18-201ENST00000363293 82 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 RNY4P6-201ENST00000363667 96 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 SNORD115-17-201ENST00000364612 82 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 MIR548A3-201ENST00000385297 97 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 MIR759-201ENST00000390224 91 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 RNU6-910P-201ENST00000390844 107 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 AL591704.2-201ENST00000421658 181 ntBASIC1.34□□□□□ -2.19
VPS4BO75351 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS4BO75351 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
VPS4BO75351 RNU6-1056P-201ENST00000383996 107 ntBASIC1.33□□□□□ -2.2
VPS4BO75351 SNORA18-201ENST00000384416 132 ntBASIC1.33□□□□□ -2.2
VPS4BO75351 MIR588-201ENST00000384900 83 ntBASIC1.33□□□□□ -2.2
VPS4BO75351 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
VPS4BO75351 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VPS4BO75351 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
VPS4BO75351 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 Y_RNA.36-201ENST00000362602 112 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 MIR548D2-201ENST00000384955 97 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 AL662814.1-201ENST00000617364 121 ntBASIC1.32□□□□□ -2.2
VPS4BO75351 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 RNU6-429P-201ENST00000384582 108 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 AC007012.1-201ENST00000567192 175 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 AC141846.1-201ENST00000568348 142 ntBASIC1.31□□□□□ -2.2
VPS4BO75351 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS4BO75351 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS4BO75351 SNORD113.3-201ENST00000364630 78 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 RNA5SP95-201ENST00000410319 137 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS4BO75351 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 RNU7-90P-201ENST00000459216 62 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 RNU7-79P-201ENST00000516082 62 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 RNU6-589P-201ENST00000516485 107 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 RNU7-6P-201ENST00000516845 62 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 AC106800.4-201ENST00000614905 153 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 AC022709.1-201ENST00000615967 87 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 MIR6779-201ENST00000617283 64 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 AC027335.2-201ENST00000624030 375 ntBASIC1.3□□□□□ -2.2
VPS4BO75351 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS4BO75351 RNA5SP325-201ENST00000363756 130 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 Y_RNA.281-201ENST00000364774 94 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 RNY1P13-201ENST00000365030 105 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 RNU6-215P-201ENST00000365169 102 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 Y_RNA.344-201ENST00000365381 112 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 Y_RNA.362-201ENST00000365518 110 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 SNORD116-21-201ENST00000384507 92 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 RNU6-880P-201ENST00000384526 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms