Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
RNF40O75150 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
RNF40O75150 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
RNF40O75150 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
RNF40O75150 PRELID3BP2-201ENST00000605362 201 ntBASIC2.97□□□□□ -1.93
RNF40O75150 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF40O75150 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF40O75150 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RNF40O75150 MIRLET7F1-201ENST00000362202 87 ntBASIC2.96□□□□□ -1.94
RNF40O75150 RNU4-82P-201ENST00000362443 140 ntBASIC2.96□□□□□ -1.94
RNF40O75150 Y_RNA.36-201ENST00000362602 112 ntBASIC2.96□□□□□ -1.94
RNF40O75150 RNA5SP48-201ENST00000363969 126 ntBASIC2.96□□□□□ -1.94
RNF40O75150 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
RNF40O75150 MIR518E-201ENST00000385252 88 ntBASIC2.96□□□□□ -1.94
RNF40O75150 RNA5SP100-201ENST00000410903 110 ntBASIC2.96□□□□□ -1.94
RNF40O75150 RNA5SP59-201ENST00000410922 110 ntBASIC2.96□□□□□ -1.94
RNF40O75150 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.96□□□□□ -1.94
RNF40O75150 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.96□□□□□ -1.94
RNF40O75150 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.96□□□□□ -1.94
RNF40O75150 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF40O75150 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF40O75150 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF40O75150 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
RNF40O75150 MIR194-1-201ENST00000384892 85 ntBASIC2.95□□□□□ -1.94
RNF40O75150 RNU6-243P-201ENST00000391140 107 ntBASIC2.95□□□□□ -1.94
RNF40O75150 MIR942-201ENST00000401111 86 ntBASIC2.95□□□□□ -1.94
RNF40O75150 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
RNF40O75150 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
RNF40O75150 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF40O75150 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF40O75150 Y_RNA.12-201ENST00000362393 112 ntBASIC2.94□□□□□ -1.94
RNF40O75150 DEFA7P-201ENST00000382676 285 ntBASIC2.94□□□□□ -1.94
RNF40O75150 RNU6-466P-201ENST00000391224 103 ntBASIC2.94□□□□□ -1.94
RNF40O75150 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF40O75150 SNORD109B-201ENST00000458961 67 ntBASIC2.94□□□□□ -1.94
RNF40O75150 SNORD109A-201ENST00000459128 67 ntBASIC2.94□□□□□ -1.94
RNF40O75150 RNU7-106P-201ENST00000459514 67 ntBASIC2.94□□□□□ -1.94
RNF40O75150 SNORA31.15-201ENST00000516771 132 ntBASIC2.94□□□□□ -1.94
RNF40O75150 YWHAEP2-201ENST00000580066 112 ntBASIC2.94□□□□□ -1.94
RNF40O75150 MIR3945-201ENST00000581853 98 ntBASIC2.94□□□□□ -1.94
RNF40O75150 YWHAEP3-201ENST00000582767 121 ntBASIC2.94□□□□□ -1.94
RNF40O75150 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
RNF40O75150 RNU6-203P-201ENST00000384038 104 ntBASIC2.93□□□□□ -1.94
RNF40O75150 RNU6-663P-201ENST00000391105 106 ntBASIC2.93□□□□□ -1.94
RNF40O75150 AC245517.4-201ENST00000448601 281 ntBASIC2.93□□□□□ -1.94
RNF40O75150 AC003982.1-202ENST00000469928 248 ntBASIC2.93□□□□□ -1.94
RNF40O75150 SNORD111.1-201ENST00000516421 86 ntBASIC2.93□□□□□ -1.94
RNF40O75150 RNU7-156P-201ENST00000517214 74 ntBASIC2.93□□□□□ -1.94
RNF40O75150 MIR4435-1-201ENST00000582552 80 ntBASIC2.93□□□□□ -1.94
RNF40O75150 U4.3-201ENST00000621047 82 ntBASIC2.93□□□□□ -1.94
RNF40O75150 Z82195.2-201ENST00000612348 18351 ntBASIC2.93□□□□□ -1.94
RNF40O75150 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF40O75150 RNU6-957P-201ENST00000363652 99 ntBASIC2.92□□□□□ -1.94
RNF40O75150 MIR196B-201ENST00000384852 84 ntBASIC2.92□□□□□ -1.94
RNF40O75150 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF40O75150 snoU13.17-201ENST00000458802 104 ntBASIC2.92□□□□□ -1.94
RNF40O75150 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
RNF40O75150 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF40O75150 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF40O75150 RNU6-330P-201ENST00000363015 107 ntBASIC2.91□□□□□ -1.94
RNF40O75150 RNU4-37P-201ENST00000410214 84 ntBASIC2.91□□□□□ -1.94
RNF40O75150 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
RNF40O75150 AC005520.4-201ENST00000604337 90 ntBASIC2.91□□□□□ -1.94
RNF40O75150 AL096861.1-201ENST00000610899 123 ntBASIC2.91□□□□□ -1.94
RNF40O75150 AC010297.1-201ENST00000623948 149 ntBASIC2.91□□□□□ -1.94
RNF40O75150 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF40O75150 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
RNF40O75150 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF40O75150 RNU6-154P-201ENST00000384306 106 ntBASIC2.9□□□□□ -1.95
RNF40O75150 MIR154-201ENST00000385243 84 ntBASIC2.9□□□□□ -1.95
RNF40O75150 SNORD41-201ENST00000386967 70 ntBASIC2.9□□□□□ -1.95
RNF40O75150 U8.13-201ENST00000390842 128 ntBASIC2.9□□□□□ -1.95
RNF40O75150 RNU6-1165P-201ENST00000410119 107 ntBASIC2.9□□□□□ -1.95
RNF40O75150 RNU6-1194P-201ENST00000516208 104 ntBASIC2.9□□□□□ -1.95
RNF40O75150 SNORA31.17-201ENST00000516953 127 ntBASIC2.9□□□□□ -1.95
RNF40O75150 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF40O75150 MIR3192-201ENST00000584920 77 ntBASIC2.9□□□□□ -1.95
RNF40O75150 uc_338.6-201ENST00000613544 171 ntBASIC2.9□□□□□ -1.95
RNF40O75150 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF40O75150 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RNF40O75150 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF40O75150 RNU6-360P-201ENST00000390944 104 ntBASIC2.89□□□□□ -1.95
RNF40O75150 SNORD63B-201ENST00000411005 70 ntBASIC2.89□□□□□ -1.95
RNF40O75150 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF40O75150 MIR4264-201ENST00000583520 66 ntBASIC2.89□□□□□ -1.95
RNF40O75150 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF40O75150 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF40O75150 Y_RNA.42-201ENST00000362660 108 ntBASIC2.88□□□□□ -1.95
RNF40O75150 AL161935.2-201ENST00000414627 60 ntBASIC2.88□□□□□ -1.95
RNF40O75150 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF40O75150 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RNF40O75150 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF40O75150 MT-TF-201ENST00000387314 71 ntBASIC2.87□□□□□ -1.95
RNF40O75150 MTND4LP19-201ENST00000403051 166 ntBASIC2.87□□□□□ -1.95
RNF40O75150 RNA5SP508-201ENST00000411327 119 ntBASIC2.87□□□□□ -1.95
RNF40O75150 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF40O75150 RNU6-322P-201ENST00000516010 103 ntBASIC2.87□□□□□ -1.95
RNF40O75150 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
RNF40O75150 MIR6715A-201ENST00000615929 79 ntBASIC2.87□□□□□ -1.95
RNF40O75150 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms