Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-915P-201ENST00000364943 103 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 RNU6-1237P-201ENST00000384777 107 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 MIR569-201ENST00000385228 96 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 SNORD89-201ENST00000390981 114 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 SNORD83.1-201ENST00000411362 77 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 RNU6-1258P-201ENST00000516911 111 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 AP001328.1-201ENST00000528550 176 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 MIR3121-201ENST00000579680 77 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 MIR4305-201ENST00000583252 102 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
CTNND1O60716 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 PVT1_3.1-201ENST00000620853 95 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 AC010332.2-201ENST00000613083 1904 ntBASIC1.14□□□□□ -2.23
CTNND1O60716 Y_RNA.171-201ENST00000363760 102 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 RNA5SP237-201ENST00000410414 113 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 AC113410.1-201ENST00000505029 247 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 RNU5E-3P-201ENST00000515913 68 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 uc_338.6-201ENST00000613544 171 ntBASIC1.13□□□□□ -2.23
CTNND1O60716 MIR30D-201ENST00000362283 70 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 RNY1P5-201ENST00000383890 115 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 Y_RNA.420-201ENST00000384043 110 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 MIR598-201ENST00000384868 97 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 MT-TF-201ENST00000387314 71 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 RNU7-113P-201ENST00000459273 62 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 RNA5SP480-201ENST00000516840 109 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 AC025627.3-201ENST00000582078 182 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 AC021443.1-201ENST00000604478 211 ntBASIC1.12□□□□□ -2.23
CTNND1O60716 SNORD115-2-201ENST00000362842 82 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 SNORD115-20-201ENST00000365099 82 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 SUMO1P3-201ENST00000439961 304 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 MIR5000-201ENST00000577717 103 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 MIR4771-2-201ENST00000577758 74 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 MIR4771-1-201ENST00000582617 74 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
CTNND1O60716 AL662814.1-201ENST00000617364 121 ntBASIC1.11□□□□□ -2.23
CTNND1O60716 Y_RNA.343-201ENST00000365354 112 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 RNU6-342P-201ENST00000384521 104 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 MIR7-2-201ENST00000384970 110 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
CTNND1O60716 RNU7-164P-201ENST00000459221 62 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 RNU6-346P-201ENST00000516288 111 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
CTNND1O60716 RNU6-369P-201ENST00000362515 102 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 Y_RNA.531-201ENST00000384589 121 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 AL512326.2-201ENST00000426359 151 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
CTNND1O60716 RNU6-977P-201ENST00000516411 103 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 RNU2-35P-201ENST00000516446 142 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 AC004812.1-201ENST00000540773 146 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 AL137067.1-201ENST00000615933 120 ntBASIC1.09□□□□□ -2.23
CTNND1O60716 SNORD114-26-201ENST00000363543 72 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 Y_RNA.366-201ENST00000365540 102 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 RNU6-746P-201ENST00000384112 109 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CTNND1O60716 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 RNU6-426P-201ENST00000516464 97 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 RNA5SP33-201ENST00000516687 98 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 AC141846.1-201ENST00000568348 142 ntBASIC1.08□□□□□ -2.24
CTNND1O60716 AC023934.1-201ENST00000574529 2389 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 RNU6-774P-201ENST00000363238 107 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 RNU1-36P-201ENST00000365130 165 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 RNU6-187P-201ENST00000384139 106 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 Y_RNA.470-201ENST00000384307 117 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 RNU6-1086P-201ENST00000410930 100 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.07□□□□□ -2.24
CTNND1O60716 RNU7-185P-201ENST00000459215 60 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 MIR4676-201ENST00000583078 72 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 MIR3133-201ENST00000583157 78 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 U7.2-201ENST00000607576 63 ntBASIC1.07□□□□□ -2.24
CTNND1O60716 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.07□□□□□ -2.24
CTNND1O60716 Y_RNA.298-201ENST00000364960 107 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 AC015818.7-201ENST00000428754 109 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 AC087499.7-201ENST00000441958 109 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 RNA5SP272-201ENST00000516095 111 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 AC108081.1-201ENST00000604358 221 ntBASIC1.06□□□□□ -2.24
CTNND1O60716 Y_RNA.114-201ENST00000363265 113 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 RNU6-1335P-201ENST00000365426 107 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 MIR125B2-201ENST00000385128 89 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 MIR1257-201ENST00000408490 117 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 RPL39P25-201ENST00000449384 154 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 RNU7-123P-201ENST00000515911 60 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 RNU7-79P-201ENST00000516082 62 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 Y_RNA.703-201ENST00000516846 111 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 MIR4804-201ENST00000581683 73 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.05□□□□□ -2.24
CTNND1O60716 RNU6-647P-201ENST00000364243 107 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 Y_RNA.280-201ENST00000364765 112 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 RNU6-949P-201ENST00000384040 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms