Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC138907.6-201ENST00000568401 126 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU6-403P-201ENST00000363163 104 ntBASIC0.49□□□□□ -2.33
SNX3O60493 RNU4-84P-201ENST00000364200 139 ntBASIC0.49□□□□□ -2.33
SNX3O60493 RNY1P13-201ENST00000365030 105 ntBASIC0.49□□□□□ -2.33
SNX3O60493 RNU6-949P-201ENST00000384040 107 ntBASIC0.49□□□□□ -2.33
SNX3O60493 AC096949.1-201ENST00000412047 152 ntBASIC0.49□□□□□ -2.33
SNX3O60493 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.49□□□□□ -2.33
SNX3O60493 RNU6-138P-201ENST00000515952 107 ntBASIC0.49□□□□□ -2.33
SNX3O60493 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.49□□□□□ -2.33
SNX3O60493 MIR3658-201ENST00000636291 56 ntBASIC0.49□□□□□ -2.33
SNX3O60493 AL589743.1-201ENST00000551932 2712 ntBASIC0.49□□□□□ -2.33
SNX3O60493 Y_RNA.13-201ENST00000362403 112 ntBASIC0.48□□□□□ -2.33
SNX3O60493 Y_RNA.470-201ENST00000384307 117 ntBASIC0.48□□□□□ -2.33
SNX3O60493 Y_RNA.588-201ENST00000391254 102 ntBASIC0.48□□□□□ -2.33
SNX3O60493 Y_RNA.617-201ENST00000410920 90 ntBASIC0.48□□□□□ -2.33
SNX3O60493 RNU7-113P-201ENST00000459273 62 ntBASIC0.48□□□□□ -2.33
SNX3O60493 RNU7-121P-201ENST00000516604 62 ntBASIC0.48□□□□□ -2.33
SNX3O60493 RNU6-861P-201ENST00000516745 106 ntBASIC0.48□□□□□ -2.33
SNX3O60493 MIR3646-201ENST00000578301 84 ntBASIC0.48□□□□□ -2.33
SNX3O60493 MIR4491-201ENST00000581087 68 ntBASIC0.48□□□□□ -2.33
SNX3O60493 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.48□□□□□ -2.33
SNX3O60493 RNY1P11-201ENST00000363759 113 ntBASIC0.47□□□□□ -2.33
SNX3O60493 Y_RNA.240-201ENST00000364469 95 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU6-690P-201ENST00000365242 106 ntBASIC0.47□□□□□ -2.33
SNX3O60493 MIR520E-201ENST00000384867 87 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU6-1086P-201ENST00000410930 100 ntBASIC0.47□□□□□ -2.33
SNX3O60493 AL022718.1-201ENST00000412004 84 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU7-79P-201ENST00000516082 62 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU2-60P-201ENST00000517290 128 ntBASIC0.47□□□□□ -2.33
SNX3O60493 RNU6-682P-201ENST00000363843 106 ntBASIC0.46□□□□□ -2.34
SNX3O60493 RNA5SP117-201ENST00000365294 118 ntBASIC0.46□□□□□ -2.34
SNX3O60493 SNORD114-22-201ENST00000365423 72 ntBASIC0.46□□□□□ -2.34
SNX3O60493 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SNX3O60493 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
SNX3O60493 AL512326.2-201ENST00000426359 151 ntBASIC0.46□□□□□ -2.34
SNX3O60493 RNU7-120P-201ENST00000459334 63 ntBASIC0.46□□□□□ -2.34
SNX3O60493 MIR6504-201ENST00000613520 61 ntBASIC0.46□□□□□ -2.34
SNX3O60493 MIR6082-201ENST00000613604 109 ntBASIC0.46□□□□□ -2.34
SNX3O60493 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SNX3O60493 SNORD37.2-201ENST00000391075 66 ntBASIC0.45□□□□□ -2.34
SNX3O60493 RNU6-240P-201ENST00000516098 97 ntBASIC0.45□□□□□ -2.34
SNX3O60493 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
SNX3O60493 RNA5SP33-201ENST00000516687 98 ntBASIC0.45□□□□□ -2.34
SNX3O60493 RNU7-35P-201ENST00000517174 62 ntBASIC0.45□□□□□ -2.34
SNX3O60493 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
SNX3O60493 MIR4305-201ENST00000583252 102 ntBASIC0.45□□□□□ -2.34
SNX3O60493 DNAJC19P2-201ENST00000593340 302 ntBASIC0.45□□□□□ -2.34
SNX3O60493 AC011603.4-201ENST00000611325 277 ntBASIC0.45□□□□□ -2.34
SNX3O60493 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
SNX3O60493 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
SNX3O60493 SNORD115-2-201ENST00000362842 82 ntBASIC0.44□□□□□ -2.34
SNX3O60493 RNU6-508P-201ENST00000363231 103 ntBASIC0.44□□□□□ -2.34
SNX3O60493 Y_RNA.120-201ENST00000363304 110 ntBASIC0.44□□□□□ -2.34
SNX3O60493 SNORD115-20-201ENST00000365099 82 ntBASIC0.44□□□□□ -2.34
SNX3O60493 SNORA72.6-201ENST00000384520 129 ntBASIC0.44□□□□□ -2.34
SNX3O60493 MTATP6P21-201ENST00000440681 189 ntBASIC0.44□□□□□ -2.34
SNX3O60493 Y_RNA.662-201ENST00000516028 97 ntBASIC0.44□□□□□ -2.34
SNX3O60493 RNU2-35P-201ENST00000516446 142 ntBASIC0.44□□□□□ -2.34
SNX3O60493 AP003327.1-201ENST00000529684 127 ntBASIC0.44□□□□□ -2.34
SNX3O60493 MIR8070-201ENST00000616510 88 ntBASIC0.44□□□□□ -2.34
SNX3O60493 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
SNX3O60493 Y_RNA.29-201ENST00000362570 113 ntBASIC0.43□□□□□ -2.34
SNX3O60493 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
SNX3O60493 Y_RNA.257-201ENST00000364596 102 ntBASIC0.43□□□□□ -2.34
SNX3O60493 RNU6-1318P-201ENST00000365389 103 ntBASIC0.43□□□□□ -2.34
SNX3O60493 SNORA32-201ENST00000384072 121 ntBASIC0.43□□□□□ -2.34
SNX3O60493 Y_RNA.441-201ENST00000384123 112 ntBASIC0.43□□□□□ -2.34
SNX3O60493 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
SNX3O60493 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
SNX3O60493 SNORA25.16-201ENST00000516741 121 ntBASIC0.43□□□□□ -2.34
SNX3O60493 RNA5SP94-201ENST00000516917 108 ntBASIC0.43□□□□□ -2.34
SNX3O60493 SNORA81.3-201ENST00000517283 198 ntBASIC0.43□□□□□ -2.34
SNX3O60493 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
SNX3O60493 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
SNX3O60493 Y_RNA.531-201ENST00000384589 121 ntBASIC0.42□□□□□ -2.34
SNX3O60493 Y_RNA.584-201ENST00000391090 114 ntBASIC0.42□□□□□ -2.34
SNX3O60493 Y_RNA.700-201ENST00000516806 100 ntBASIC0.42□□□□□ -2.34
SNX3O60493 RNU6-765P-201ENST00000516916 99 ntBASIC0.42□□□□□ -2.34
SNX3O60493 AC133485.4-201ENST00000561835 220 ntBASIC0.42□□□□□ -2.34
SNX3O60493 AC138907.4-201ENST00000570107 226 ntBASIC0.42□□□□□ -2.34
SNX3O60493 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
SNX3O60493 MIR3124-201ENST00000582636 67 ntBASIC0.42□□□□□ -2.34
SNX3O60493 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
SNX3O60493 Y_RNA.191-201ENST00000363972 113 ntBASIC0.41□□□□□ -2.34
SNX3O60493 Y_RNA.251-201ENST00000364551 99 ntBASIC0.41□□□□□ -2.34
SNX3O60493 MIR644A-201ENST00000385262 94 ntBASIC0.41□□□□□ -2.34
SNX3O60493 Y_RNA.651-201ENST00000459380 103 ntBASIC0.41□□□□□ -2.34
SNX3O60493 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
SNX3O60493 AC074198.2-201ENST00000508153 258 ntBASIC0.41□□□□□ -2.34
SNX3O60493 MIR548AE2-201ENST00000583456 67 ntBASIC0.41□□□□□ -2.34
SNX3O60493 AC021443.1-201ENST00000604478 211 ntBASIC0.41□□□□□ -2.34
SNX3O60493 AC004792.1-201ENST00000614523 137 ntBASIC0.41□□□□□ -2.34
SNX3O60493 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.4□□□□□ -2.35
SNX3O60493 Y_RNA.4-201ENST00000362333 112 ntBASIC0.4□□□□□ -2.35
SNX3O60493 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
SNX3O60493 RNU6-309P-201ENST00000364573 106 ntBASIC0.4□□□□□ -2.35
SNX3O60493 Y_RNA.272-201ENST00000364696 102 ntBASIC0.4□□□□□ -2.35
SNX3O60493 SNORD18B-201ENST00000365659 72 ntBASIC0.4□□□□□ -2.35
SNX3O60493 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms