Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AP000676.1-201ENST00000533307 52 ntBASIC-1.38□□□□□ -2.63
SSNA1O43805 MIR4500-201ENST00000579472 76 ntBASIC-1.38□□□□□ -2.63
SSNA1O43805 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.38□□□□□ -2.63
SSNA1O43805 AL365205.2-201ENST00000594586 68 ntBASIC-1.38□□□□□ -2.63
SSNA1O43805 RNU6-900P-201ENST00000384498 102 ntBASIC-1.39□□□□□ -2.63
SSNA1O43805 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.39□□□□□ -2.63
SSNA1O43805 AL731563.1-201ENST00000442202 214 ntBASIC-1.39□□□□□ -2.63
SSNA1O43805 SNORA40.14-201ENST00000516543 86 ntBASIC-1.39□□□□□ -2.63
SSNA1O43805 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 RNY3P5-201ENST00000384127 102 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 RNU6-524P-201ENST00000384270 107 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 MIR519A1-201ENST00000385257 85 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 SNORD38.3-201ENST00000516599 73 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 RNU6-86P-201ENST00000606534 107 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 MIR6851-201ENST00000617060 67 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 AL138825.1-201ENST00000618587 192 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 AP000770.2-201ENST00000623694 100 ntBASIC-1.4□□□□□ -2.63
SSNA1O43805 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 RNU4-90P-201ENST00000362773 141 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 SNORD115-2-201ENST00000362842 82 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 SNORD115-20-201ENST00000365099 82 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 MIR224-201ENST00000384889 81 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 SCARNA15-202ENST00000516881 127 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 MIR4460-201ENST00000577862 86 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 MIR548AE2-201ENST00000583456 67 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 U4.5-201ENST00000617137 123 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 snoU18.1-201ENST00000629629 71 ntBASIC-1.41□□□□□ -2.64
SSNA1O43805 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 MIR617-201ENST00000385030 97 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 SNORD63B-201ENST00000411005 70 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 RNU6-559P-201ENST00000516151 98 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 RNA5SP285-201ENST00000516619 119 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 SNORA20.3-201ENST00000516880 132 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 MIR376A1-201ENST00000616574 68 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.42□□□□□ -2.64
SSNA1O43805 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 SNORD83B-201ENST00000386745 93 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 MIR548I2-201ENST00000408348 149 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 RNU4-63P-201ENST00000411313 118 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 AC082651.2-201ENST00000496833 166 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 SNORD58B-201ENST00000607313 66 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 AC002553.4-201ENST00000616896 331 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 AC104985.2-201ENST00000620598 500 ntBASIC-1.43□□□□□ -2.64
SSNA1O43805 RNY1P6-201ENST00000384193 109 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
SSNA1O43805 AL606845.1-201ENST00000404881 255 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 MIR1277-201ENST00000408536 78 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 AC069439.1-201ENST00000494739 167 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.44□□□□□ -2.64
SSNA1O43805 AC011603.4-201ENST00000611325 277 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 AL606534.2-204ENST00000635008 178 ntBASIC-1.44□□□□□ -2.64
SSNA1O43805 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 Y_RNA.238-201ENST00000364441 102 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 MIR489-201ENST00000384923 84 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 MIR613-201ENST00000385248 95 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 RNU6-721P-201ENST00000410155 105 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 SNORA13-201ENST00000458790 133 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 snoU13.13-201ENST00000458842 104 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 RNU6-570P-201ENST00000517051 105 ntBASIC-1.45□□□□□ -2.64
SSNA1O43805 MIR20A-201ENST00000362279 71 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 RNU6-845P-201ENST00000362578 103 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 RNU4-73P-201ENST00000363164 141 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 AC022079.1-201ENST00000621546 602 ntBASIC-1.46□□□□□ -2.64
SSNA1O43805 SNORA25.1-201ENST00000362326 128 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 MIR604-201ENST00000384880 94 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 AC098614.3-201ENST00000438957 440 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.47□□□□□ -2.64
SSNA1O43805 RNU7-48P-201ENST00000458875 63 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 RNU6-718P-201ENST00000516166 105 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 SNORA27.4-201ENST00000516650 95 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 RNU6-453P-201ENST00000516819 85 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 MIR3681-201ENST00000580089 72 ntBASIC-1.47□□□□□ -2.64
SSNA1O43805 RNU6-170P-201ENST00000362832 104 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 RNA5SP457-201ENST00000363657 124 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 SNORD114-25-201ENST00000363742 72 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 SNORD81.2-201ENST00000365153 76 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 SNORD115-44-201ENST00000365391 82 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 MTND4LP30-201ENST00000454092 297 ntBASIC-1.48□□□□□ -2.65
SSNA1O43805 MTND4LP32-201ENST00000636111 270 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms