Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 snoU13.2-201ENST00000459201 104 ntBASIC0.78□□□□□ -2.28
PHF1O43189 RNU7-70P-201ENST00000516941 66 ntBASIC0.78□□□□□ -2.28
PHF1O43189 MIR3152-201ENST00000579801 74 ntBASIC0.78□□□□□ -2.28
PHF1O43189 MIR6740-201ENST00000618268 113 ntBASIC0.78□□□□□ -2.28
PHF1O43189 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
PHF1O43189 AC010487.4-201ENST00000637027 61 ntBASIC0.78□□□□□ -2.28
PHF1O43189 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
PHF1O43189 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PHF1O43189 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
PHF1O43189 SNORA22.1-201ENST00000362701 134 ntBASIC0.77□□□□□ -2.29
PHF1O43189 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
PHF1O43189 RNU6-1062P-201ENST00000383908 107 ntBASIC0.77□□□□□ -2.29
PHF1O43189 RNU6-460P-201ENST00000391158 108 ntBASIC0.77□□□□□ -2.29
PHF1O43189 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
PHF1O43189 Y_RNA.757-201ENST00000578934 114 ntBASIC0.77□□□□□ -2.29
PHF1O43189 MIR3121-201ENST00000579680 77 ntBASIC0.77□□□□□ -2.29
PHF1O43189 uc_338.6-201ENST00000613544 171 ntBASIC0.77□□□□□ -2.29
PHF1O43189 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.77□□□□□ -2.29
PHF1O43189 SNORD115-2-201ENST00000362842 82 ntBASIC0.76□□□□□ -2.29
PHF1O43189 RNU6-508P-201ENST00000363231 103 ntBASIC0.76□□□□□ -2.29
PHF1O43189 RNU6-309P-201ENST00000364573 106 ntBASIC0.76□□□□□ -2.29
PHF1O43189 SNORD115-20-201ENST00000365099 82 ntBASIC0.76□□□□□ -2.29
PHF1O43189 RNU6-716P-201ENST00000365621 103 ntBASIC0.76□□□□□ -2.29
PHF1O43189 MIR513C-201ENST00000401352 84 ntBASIC0.76□□□□□ -2.29
PHF1O43189 RNU6-893P-201ENST00000458841 100 ntBASIC0.76□□□□□ -2.29
PHF1O43189 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
PHF1O43189 RNU6-1258P-201ENST00000516911 111 ntBASIC0.76□□□□□ -2.29
PHF1O43189 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
PHF1O43189 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.76□□□□□ -2.29
PHF1O43189 Y_RNA.258-201ENST00000364613 105 ntBASIC0.75□□□□□ -2.29
PHF1O43189 RNU6-915P-201ENST00000364943 103 ntBASIC0.75□□□□□ -2.29
PHF1O43189 Y_RNA.420-201ENST00000384043 110 ntBASIC0.75□□□□□ -2.29
PHF1O43189 SNORA2B-201ENST00000384583 137 ntBASIC0.75□□□□□ -2.29
PHF1O43189 SNORA20-201ENST00000384662 132 ntBASIC0.75□□□□□ -2.29
PHF1O43189 RNU6-205P-201ENST00000390858 107 ntBASIC0.75□□□□□ -2.29
PHF1O43189 RNU7-62P-201ENST00000458856 62 ntBASIC0.75□□□□□ -2.29
PHF1O43189 SNORA25.12-201ENST00000516202 82 ntBASIC0.75□□□□□ -2.29
PHF1O43189 RNA5SP395-201ENST00000516567 118 ntBASIC0.75□□□□□ -2.29
PHF1O43189 Y_RNA.690-201ENST00000516603 95 ntBASIC0.75□□□□□ -2.29
PHF1O43189 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
PHF1O43189 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.75□□□□□ -2.29
PHF1O43189 MIR30D-201ENST00000362283 70 ntBASIC0.74□□□□□ -2.29
PHF1O43189 RNU4-16P-201ENST00000364737 141 ntBASIC0.74□□□□□ -2.29
PHF1O43189 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
PHF1O43189 Y_RNA.488-201ENST00000384403 102 ntBASIC0.74□□□□□ -2.29
PHF1O43189 Y_RNA.568-201ENST00000384742 113 ntBASIC0.74□□□□□ -2.29
PHF1O43189 MIR588-201ENST00000384900 83 ntBASIC0.74□□□□□ -2.29
PHF1O43189 SNORD12C-201ENST00000386307 89 ntBASIC0.74□□□□□ -2.29
PHF1O43189 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
PHF1O43189 MIR1827-201ENST00000408549 66 ntBASIC0.74□□□□□ -2.29
PHF1O43189 RNU6-1165P-201ENST00000410119 107 ntBASIC0.74□□□□□ -2.29
PHF1O43189 RNU6-426P-201ENST00000516464 97 ntBASIC0.74□□□□□ -2.29
PHF1O43189 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
PHF1O43189 RNU6-94P-201ENST00000607728 107 ntBASIC0.74□□□□□ -2.29
PHF1O43189 MIR8087-201ENST00000612745 78 ntBASIC0.74□□□□□ -2.29
PHF1O43189 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
PHF1O43189 RNU6-690P-201ENST00000365242 106 ntBASIC0.73□□□□□ -2.29
PHF1O43189 SNORD50.2-201ENST00000365465 70 ntBASIC0.73□□□□□ -2.29
PHF1O43189 SNORD18B-201ENST00000365659 72 ntBASIC0.73□□□□□ -2.29
PHF1O43189 RNU6-746P-201ENST00000384112 109 ntBASIC0.73□□□□□ -2.29
PHF1O43189 MT-TF-201ENST00000387314 71 ntBASIC0.73□□□□□ -2.29
PHF1O43189 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
PHF1O43189 MIR18B-201ENST00000454574 71 ntBASIC0.73□□□□□ -2.29
PHF1O43189 snoU13.21-201ENST00000459368 105 ntBASIC0.73□□□□□ -2.29
PHF1O43189 AC113410.1-201ENST00000505029 247 ntBASIC0.73□□□□□ -2.29
PHF1O43189 RNU6-240P-201ENST00000516098 97 ntBASIC0.73□□□□□ -2.29
PHF1O43189 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
PHF1O43189 RNU2-35P-201ENST00000516446 142 ntBASIC0.73□□□□□ -2.29
PHF1O43189 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
PHF1O43189 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
PHF1O43189 MIR4305-201ENST00000583252 102 ntBASIC0.73□□□□□ -2.29
PHF1O43189 AC108081.1-201ENST00000604358 221 ntBASIC0.73□□□□□ -2.29
PHF1O43189 U7.2-201ENST00000607576 63 ntBASIC0.73□□□□□ -2.29
PHF1O43189 AL662814.1-201ENST00000617364 121 ntBASIC0.73□□□□□ -2.29
PHF1O43189 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
PHF1O43189 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
PHF1O43189 RNA5SP476-201ENST00000516613 103 ntBASIC0.72□□□□□ -2.29
PHF1O43189 Y_RNA.692-201ENST00000516627 105 ntBASIC0.72□□□□□ -2.29
PHF1O43189 Y_RNA.703-201ENST00000516846 111 ntBASIC0.72□□□□□ -2.29
PHF1O43189 AP001328.1-201ENST00000528550 176 ntBASIC0.72□□□□□ -2.29
PHF1O43189 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PHF1O43189 AC010332.2-201ENST00000613083 1904 ntBASIC0.72□□□□□ -2.29
PHF1O43189 Y_RNA.171-201ENST00000363760 102 ntBASIC0.71□□□□□ -2.3
PHF1O43189 Y_RNA.366-201ENST00000365540 102 ntBASIC0.71□□□□□ -2.3
PHF1O43189 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
PHF1O43189 MTND4LP9-201ENST00000427694 174 ntBASIC0.71□□□□□ -2.3
PHF1O43189 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
PHF1O43189 RNU6-346P-201ENST00000516288 111 ntBASIC0.71□□□□□ -2.3
PHF1O43189 RNU7-35P-201ENST00000517174 62 ntBASIC0.71□□□□□ -2.3
PHF1O43189 IGKV1-22-201ENST00000524313 326 ntBASIC0.71□□□□□ -2.3
PHF1O43189 AC133485.4-201ENST00000561835 220 ntBASIC0.71□□□□□ -2.3
PHF1O43189 AC138907.4-201ENST00000570107 226 ntBASIC0.71□□□□□ -2.3
PHF1O43189 Y_RNA.298-201ENST00000364960 107 ntBASIC0.7□□□□□ -2.3
PHF1O43189 Y_RNA.343-201ENST00000365354 112 ntBASIC0.7□□□□□ -2.3
PHF1O43189 Y_RNA.470-201ENST00000384307 117 ntBASIC0.7□□□□□ -2.3
PHF1O43189 Y_RNA.531-201ENST00000384589 121 ntBASIC0.7□□□□□ -2.3
PHF1O43189 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.7□□□□□ -2.3
PHF1O43189 RNU6-257P-201ENST00000410238 98 ntBASIC0.7□□□□□ -2.3
PHF1O43189 Y_RNA.617-201ENST00000410920 90 ntBASIC0.7□□□□□ -2.3
PHF1O43189 RNU6-1086P-201ENST00000410930 100 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms