Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-447P-201ENST00000410293 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-1118P-201ENST00000410382 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-1076P-201ENST00000410397 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-355P-201ENST00000410427 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-791P-201ENST00000410467 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-705P-201ENST00000410601 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-1100P-201ENST00000410691 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-860P-201ENST00000410860 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-1217P-201ENST00000411276 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU6-785P-201ENST00000411324 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 RNU7-70P-201ENST00000516941 66 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 AL162730.1-201ENST00000605734 292 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 U6.90-201ENST00000614007 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 U6.70-201ENST00000620287 104 ntBASIC0.59□□□□□ -2.31
NPHP1O15259 MIR411-201ENST00000362239 96 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 Y_RNA.144-201ENST00000363521 113 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 Y_RNA.200-201ENST00000364018 102 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 SNORA25.7-201ENST00000364375 127 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 RNU6-597P-201ENST00000365620 102 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 AL078595.1-201ENST00000404458 226 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 RNU6-1149P-201ENST00000516810 97 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.58□□□□□ -2.32
NPHP1O15259 AC021613.1-201ENST00000623880 111 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 MIR6841-201ENST00000637129 72 ntBASIC0.58□□□□□ -2.32
NPHP1O15259 Y_RNA.83-201ENST00000363005 113 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 SNORA20-201ENST00000384662 132 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 RNU7-156P-201ENST00000517214 74 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 MIR4431-201ENST00000579990 94 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 AC009779.6-201ENST00000603972 165 ntBASIC0.57□□□□□ -2.32
NPHP1O15259 RNU6-47P-201ENST00000383866 107 ntBASIC0.56□□□□□ -2.32
NPHP1O15259 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
NPHP1O15259 AL662814.1-201ENST00000617364 121 ntBASIC0.56□□□□□ -2.32
NPHP1O15259 SNORA22.1-201ENST00000362701 134 ntBASIC0.55□□□□□ -2.32
NPHP1O15259 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP1O15259 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
NPHP1O15259 AC002350.1-201ENST00000490759 375 ntBASIC0.55□□□□□ -2.32
NPHP1O15259 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
NPHP1O15259 MTND5P32-201ENST00000560711 1802 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 RNU6-1020P-201ENST00000363684 107 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 RNU6-1336P-201ENST00000383886 109 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 SNORA50A-201ENST00000384225 134 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 Y_RNA.521-201ENST00000384560 114 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 RNA5SP237-201ENST00000410414 113 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 AC130289.1-201ENST00000577321 73 ntBASIC0.54□□□□□ -2.32
NPHP1O15259 RNA5SP62-201ENST00000363457 110 ntBASIC0.53□□□□□ -2.32
NPHP1O15259 RNU6-312P-201ENST00000364629 107 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 RNU4-16P-201ENST00000364737 141 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 Y_RNA.489-201ENST00000384410 101 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 RNU6-768P-201ENST00000384683 107 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 SNORD93-201ENST00000408813 74 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 AC141846.1-201ENST00000568348 142 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
NPHP1O15259 Y_RNA.52-201ENST00000362760 96 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 Y_RNA.68-201ENST00000362881 102 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 Y_RNA.233-201ENST00000364407 101 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 RNY1P6-201ENST00000384193 109 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 RNU6-893P-201ENST00000458841 100 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 RNU6-1219P-201ENST00000516143 112 ntBASIC0.51□□□□□ -2.33
NPHP1O15259 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 RNU6-1082P-201ENST00000364574 107 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 Y_RNA.274-201ENST00000364714 101 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 Y_RNA.515-201ENST00000384535 112 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 U8.15-201ENST00000390947 134 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 RNU6-1258P-201ENST00000516911 111 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 RNU6-448P-201ENST00000517052 107 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 Y_RNA.757-201ENST00000578934 114 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 MIR8066-201ENST00000617280 78 ntBASIC0.5□□□□□ -2.33
NPHP1O15259 RNU6-349P-201ENST00000362402 107 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 SNORA18-201ENST00000384416 132 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 RNU6-679P-201ENST00000391003 106 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 RNU4-83P-201ENST00000410863 133 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 AC107027.2-201ENST00000512197 115 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 RNA5SP236-201ENST00000516169 116 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 AC022559.1-201ENST00000520905 205 ntBASIC0.49□□□□□ -2.33
NPHP1O15259 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.49□□□□□ -2.33
NPHP1O15259 Y_RNA.42-201ENST00000362660 108 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 AC096949.1-201ENST00000412047 152 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 RPL39P25-201ENST00000449384 154 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 Y_RNA.681-201ENST00000516445 113 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
NPHP1O15259 Y_RNA.171-201ENST00000363760 102 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 Y_RNA.178-201ENST00000363832 102 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 Y_RNA.337-201ENST00000365312 102 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 RNU6-949P-201ENST00000384040 107 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 Y_RNA.588-201ENST00000391254 102 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 RNA5SP144-201ENST00000410846 116 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 RNU5E-9P-201ENST00000411164 104 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 Y_RNA.644-201ENST00000459006 113 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 Y_RNA.674-201ENST00000516362 113 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 AC141273.2-201ENST00000618989 130 ntBASIC0.47□□□□□ -2.33
NPHP1O15259 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
NPHP1O15259 RNU6-379P-201ENST00000363813 104 ntBASIC0.46□□□□□ -2.34
NPHP1O15259 Y_RNA.188-201ENST00000363952 111 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 280.1 ms