Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 Y_RNA.626-201ENST00000411288 95 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 RNU6-893P-201ENST00000458841 100 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 Y_RNA.673-201ENST00000516306 88 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
SLC28A1O00337 Y_RNA.65-201ENST00000362846 100 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.133-201ENST00000363428 110 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 SNORA63-201ENST00000363450 132 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 RNU6-1099P-201ENST00000363533 107 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 RNU6-694P-201ENST00000364071 147 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.412-201ENST00000384001 104 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.470-201ENST00000384307 117 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 RNU6-291P-201ENST00000384720 107 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.571-201ENST00000384753 98 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 SNORD58.1-201ENST00000391313 66 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 MTCYBP9-201ENST00000431021 303 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.797-201ENST00000515977 94 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.668-201ENST00000516233 93 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 MIR6515-201ENST00000619843 57 ntBASIC0.17□□□□□ -2.38
SLC28A1O00337 Y_RNA.149-201ENST00000363558 117 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 Y_RNA.182-201ENST00000363880 111 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 Y_RNA.288-201ENST00000364854 92 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 MIR548H3-201ENST00000408771 118 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 RNU5E-9P-201ENST00000411164 104 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 RNU6-135P-201ENST00000516769 101 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 MIR7107-201ENST00000611489 80 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 MIR6755-201ENST00000619993 66 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 U6.106-201ENST00000636360 105 ntBASIC0.16□□□□□ -2.38
SLC28A1O00337 Y_RNA.20-201ENST00000362479 113 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 SNORD114-23-201ENST00000363536 72 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 RNU6-275P-201ENST00000364910 107 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SLC28A1O00337 RNA5SP144-201ENST00000410846 116 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 SUMO1P3-201ENST00000439961 304 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 RNA5SP236-201ENST00000516169 116 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 RNA5SP268-201ENST00000516828 124 ntBASIC0.15□□□□□ -2.39
SLC28A1O00337 Y_RNA.52-201ENST00000362760 96 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 Y_RNA.60-201ENST00000362831 98 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 Y_RNA.121-201ENST00000363309 113 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNA5SP245-201ENST00000364239 121 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNU6-1229P-201ENST00000364295 107 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNY1P6-201ENST00000384193 109 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 AC069271.1-201ENST00000445577 156 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 MIR3128-201ENST00000581957 66 ntBASIC0.14□□□□□ -2.39
SLC28A1O00337 RNU6-1082P-201ENST00000364574 107 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNU6-187P-201ENST00000384139 106 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 Y_RNA.536-201ENST00000384621 113 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNU6-918P-201ENST00000391219 106 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNU6-1086P-201ENST00000410930 100 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 MIR1270-201ENST00000459320 83 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNU7-79P-201ENST00000516082 62 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 Y_RNA.697-201ENST00000516776 113 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNU7-35P-201ENST00000517174 62 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 RNA5SP47-201ENST00000517230 109 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 MIR6828-201ENST00000636181 60 ntBASIC0.13□□□□□ -2.39
SLC28A1O00337 SNORA63.5-201ENST00000363548 123 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 Y_RNA.350-201ENST00000365409 98 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 Y_RNA.366-201ENST00000365540 102 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 RNU6-47P-201ENST00000383866 107 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 RNU6-768P-201ENST00000384683 107 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 RNU6-535P-201ENST00000384722 107 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 MIR598-201ENST00000384868 97 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 RNU6-531P-201ENST00000516694 104 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 AL359881.1-201ENST00000602916 267 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
SLC28A1O00337 Y_RNA.75-201ENST00000362927 97 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNY1P11-201ENST00000363759 113 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 SNORA25.7-201ENST00000364375 127 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 SNORA32-201ENST00000384072 121 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNU4-70P-201ENST00000384579 139 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 SNORD28-201ENST00000384706 75 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 AC108059.2-201ENST00000434626 151 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNA5SP227-201ENST00000516184 113 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNU6-327P-201ENST00000516270 127 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 SCARNA15.1-201ENST00000516384 125 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNU6-111P-201ENST00000517179 105 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 RNU2-60P-201ENST00000517290 128 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
SLC28A1O00337 Y_RNA.120-201ENST00000363304 110 ntBASIC0.1□□□□□ -2.39
SLC28A1O00337 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
SLC28A1O00337 RNU2-35P-201ENST00000516446 142 ntBASIC0.1□□□□□ -2.39
SLC28A1O00337 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.1□□□□□ -2.39
SLC28A1O00337 MIR3149-201ENST00000584629 83 ntBASIC0.1□□□□□ -2.39
SLC28A1O00337 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
SLC28A1O00337 RNU6-508P-201ENST00000363231 103 ntBASIC0.09□□□□□ -2.4
SLC28A1O00337 RNA5SP133-201ENST00000363368 119 ntBASIC0.09□□□□□ -2.4
SLC28A1O00337 RNU6-1011P-201ENST00000384668 107 ntBASIC0.09□□□□□ -2.4
SLC28A1O00337 RNU7-113P-201ENST00000459273 62 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms