Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 MIR548H5-201ENST00000580314 60 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 AC011921.3-201ENST00000605540 361 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 AC084368.1-201ENST00000620935 65 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 AC139792.2-201ENST00000624218 587 ntBASIC-0.5□□□□□ -2.49
UPK1AO00322 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
UPK1AO00322 SNORD49B-201ENST00000365172 72 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 RNU6-728P-201ENST00000365375 104 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
UPK1AO00322 RNA5SP300-201ENST00000391197 107 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 RPL21P38-201ENST00000418090 167 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 AC006210.1-201ENST00000424882 111 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 SNORD126-201ENST00000459475 77 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 RNU6-570P-201ENST00000517051 105 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 RNU7-35P-201ENST00000517174 62 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 RNU7-10P-201ENST00000607194 63 ntBASIC-0.51□□□□□ -2.49
UPK1AO00322 MIR148A-201ENST00000362215 68 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 MIR329-2-201ENST00000385029 84 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 SNORD110-201ENST00000408189 75 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 TRBVB-201ENST00000477100 408 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 SERF1AP1-201ENST00000514575 187 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 RNU6-453P-201ENST00000516819 85 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 uc_338.28-201ENST00000612082 187 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 AL162726.3-218ENST00000636401 95 ntBASIC-0.52□□□□□ -2.49
UPK1AO00322 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 RNU6-770P-201ENST00000363929 105 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 MIR7-2-201ENST00000384970 110 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 RNU7-113P-201ENST00000459273 62 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 MIR4263-201ENST00000584745 83 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 AL356055.1-201ENST00000602528 446 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 AC098479.1-201ENST00000609225 154 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.53□□□□□ -2.49
UPK1AO00322 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.53□□□□□ -2.49
UPK1AO00322 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 RNA5SP257-201ENST00000363023 116 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 RNU6-509P-201ENST00000363519 107 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 SNORD41.1-201ENST00000391000 69 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 AL022718.1-201ENST00000412004 84 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 uc_338.36-201ENST00000622331 158 ntBASIC-0.54□□□□□ -2.5
UPK1AO00322 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 RNA5SP403-201ENST00000363598 108 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 MTND4LP11-201ENST00000422184 280 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 RPS29P8-201ENST00000445109 171 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 AC082651.2-201ENST00000496833 166 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 SNORD116-25-201ENST00000516517 92 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 RNA5SP33-201ENST00000516687 98 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 FTX_2.1-201ENST00000618816 94 ntBASIC-0.55□□□□□ -2.5
UPK1AO00322 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 SNORA32-201ENST00000384072 121 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 RNY1P6-201ENST00000384193 109 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 AC113618.1-201ENST00000416747 285 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 RNU6-875P-201ENST00000516488 106 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 NAMPTP3-201ENST00000569273 224 ntBASIC-0.56□□□□□ -2.5
UPK1AO00322 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
UPK1AO00322 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 RNU6-429P-201ENST00000384582 108 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 MIR635-201ENST00000384830 98 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 MIR876-201ENST00000401147 81 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 ELOCP20-201ENST00000422460 345 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 RBMX2P4-201ENST00000441256 376 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 SNORD67.1-201ENST00000516618 108 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 RNU7-137P-201ENST00000516788 62 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
UPK1AO00322 MIR369-201ENST00000362155 70 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 RNY1P2-201ENST00000364820 117 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 MIR516B1-201ENST00000385211 90 ntBASIC-0.58□□□□□ -2.5
UPK1AO00322 RNA5SP144-201ENST00000410846 116 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms