Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
PDLIM1O00151 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
PDLIM1O00151 MIR6082-201ENST00000613604 109 ntBASIC0.27□□□□□ -2.37
PDLIM1O00151 Y_RNA.20-201ENST00000362479 113 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 Y_RNA.133-201ENST00000363428 110 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 Y_RNA.478-201ENST00000384358 107 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 MIR644A-201ENST00000385262 94 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
PDLIM1O00151 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 MTND5P32-201ENST00000560711 1802 ntBASIC0.26□□□□□ -2.37
PDLIM1O00151 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 RNU6-275P-201ENST00000364910 107 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 RNU6-949P-201ENST00000384040 107 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 RNY1P4-201ENST00000384595 115 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 MIR568-201ENST00000385036 95 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 AL512326.2-201ENST00000426359 151 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 AL118496.2-201ENST00000448300 230 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.25□□□□□ -2.37
PDLIM1O00151 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 MIR3128-201ENST00000581957 66 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.25□□□□□ -2.37
PDLIM1O00151 AC062037.2-201ENST00000610137 73 ntBASIC0.25□□□□□ -2.37
PDLIM1O00151 Y_RNA.162-201ENST00000363683 102 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 RNY1P6-201ENST00000384193 109 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 Y_RNA.588-201ENST00000391254 102 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 Y_RNA.668-201ENST00000516233 93 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 RNU4-71P-201ENST00000516258 113 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 RNU6-1045P-201ENST00000516321 107 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 Y_RNA.757-201ENST00000578934 114 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 U6.106-201ENST00000636360 105 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
PDLIM1O00151 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
PDLIM1O00151 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 Y_RNA.171-201ENST00000363760 102 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 SNORA20.1-201ENST00000364790 130 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 RNU6-1336P-201ENST00000383886 109 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 SNORD58.1-201ENST00000391313 66 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 RNU6-1086P-201ENST00000410930 100 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 DEFB131E-201ENST00000532329 154 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 MRPS18CP4-201ENST00000535821 231 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 U4.1-201ENST00000620349 87 ntBASIC0.23□□□□□ -2.37
PDLIM1O00151 Y_RNA.36-201ENST00000362602 112 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 Y_RNA.412-201ENST00000384001 104 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 RNU7-113P-201ENST00000459273 62 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 RNU7-79P-201ENST00000516082 62 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 Y_RNA.697-201ENST00000516776 113 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
PDLIM1O00151 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
PDLIM1O00151 Y_RNA.75-201ENST00000362927 97 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 RNU6-535P-201ENST00000384722 107 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 AL022718.1-201ENST00000412004 84 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 SNORA31.14-201ENST00000516728 116 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 SNORA25.16-201ENST00000516741 121 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 RNU6-1258P-201ENST00000516911 111 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.21□□□□□ -2.38
PDLIM1O00151 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 Y_RNA.32-201ENST00000362589 110 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 Y_RNA.60-201ENST00000362831 98 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNU6-1229P-201ENST00000364295 107 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 Y_RNA.536-201ENST00000384621 113 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 MIR193B-201ENST00000384907 83 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNA5SP144-201ENST00000410846 116 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNU6-1023P-201ENST00000516137 106 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNA5SP268-201ENST00000516828 124 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 RNU6-111P-201ENST00000517179 105 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
PDLIM1O00151 Y_RNA.52-201ENST00000362760 96 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 AC096949.1-201ENST00000412047 152 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 SCARNA15.1-201ENST00000516384 125 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 Y_RNA.680-201ENST00000516441 93 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 MTND5P34-201ENST00000568888 325 ntBASIC0.19□□□□□ -2.38
PDLIM1O00151 Y_RNA.83-201ENST00000363005 113 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-1099P-201ENST00000363533 107 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 SNORD114-26-201ENST00000363543 72 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-690P-201ENST00000365242 106 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 Y_RNA.447-201ENST00000384184 113 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 Y_RNA.470-201ENST00000384307 117 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-918P-201ENST00000391219 106 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 SUMO1P3-201ENST00000439961 304 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-863P-201ENST00000515989 104 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-1194P-201ENST00000516208 104 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNU6-135P-201ENST00000516769 101 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 RNA5SP480-201ENST00000516840 109 ntBASIC0.18□□□□□ -2.38
PDLIM1O00151 Y_RNA.200-201ENST00000364018 102 ntBASIC0.17□□□□□ -2.38
PDLIM1O00151 RNU6-1082P-201ENST00000364574 107 ntBASIC0.17□□□□□ -2.38
PDLIM1O00151 RNU6-818P-201ENST00000364837 108 ntBASIC0.17□□□□□ -2.38
PDLIM1O00151 RNU6-702P-201ENST00000364982 107 ntBASIC0.17□□□□□ -2.38
PDLIM1O00151 SNORA32-201ENST00000384072 121 ntBASIC0.17□□□□□ -2.38
PDLIM1O00151 RNU6-196P-201ENST00000384315 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms