Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SNORA72.6-201ENST00000384520 129 ntBASIC0.26□□□□□ -2.37
NPIPA2E9PIF3 SCARNA15-202ENST00000516881 127 ntBASIC0.26□□□□□ -2.37
NPIPA2E9PIF3 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
NPIPA2E9PIF3 MIR4491-201ENST00000581087 68 ntBASIC0.26□□□□□ -2.37
NPIPA2E9PIF3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 MIR4308-201ENST00000580634 81 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 AL360085.1-201ENST00000604713 532 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 MIR6082-201ENST00000613604 109 ntBASIC0.25□□□□□ -2.37
NPIPA2E9PIF3 RNA5SP457-201ENST00000363657 124 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 RNU6-1011P-201ENST00000384668 107 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 MIR624-201ENST00000385217 97 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.626-201ENST00000411288 95 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 MTND1P19-201ENST00000511780 315 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 RNU6-469P-201ENST00000516253 101 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 MTND5P32-201ENST00000560711 1802 ntBASIC0.24□□□□□ -2.37
NPIPA2E9PIF3 SNORA36.1-201ENST00000363424 132 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 RNU6-643P-201ENST00000384018 107 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 RNU4-70P-201ENST00000384579 139 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.539-201ENST00000384635 107 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.562-201ENST00000384695 113 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 AC096949.1-201ENST00000412047 152 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 AL109933.3-201ENST00000619095 188 ntBASIC0.23□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 RNU6-949P-201ENST00000384040 107 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 MIR568-201ENST00000385036 95 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 SNORA31.14-201ENST00000516728 116 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.22□□□□□ -2.37
NPIPA2E9PIF3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 RNU6-694P-201ENST00000364071 147 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 SNORA25.7-201ENST00000364375 127 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 RNU6-327P-201ENST00000516270 127 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 SNORA25.16-201ENST00000516741 121 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
NPIPA2E9PIF3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 MTCYBP9-201ENST00000431021 303 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 RNU6-893P-201ENST00000458841 100 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 MRPS18CP4-201ENST00000535821 231 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 MTND5P34-201ENST00000568888 325 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 MIR3128-201ENST00000581957 66 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 U6.106-201ENST00000636360 105 ntBASIC0.2□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.133-201ENST00000363428 110 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNY1P6-201ENST00000384193 109 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.515-201ENST00000384535 112 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNU6-535P-201ENST00000384722 107 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNU7-79P-201ENST00000516082 62 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNA5SP268-201ENST00000516828 124 ntBASIC0.19□□□□□ -2.38
NPIPA2E9PIF3 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.20-201ENST00000362479 113 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 RNU6-275P-201ENST00000364910 107 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.350-201ENST00000365409 98 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.556-201ENST00000384677 113 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 RNU6-291P-201ENST00000384720 107 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 MIR1302-3-201ENST00000408128 138 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 SUMO1P3-201ENST00000439961 304 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.680-201ENST00000516441 93 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 RNU6-765P-201ENST00000516916 99 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 DEFB131E-201ENST00000532329 154 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 AC078938.1-201ENST00000620993 318 ntBASIC0.18□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 RNA5SP144-201ENST00000410846 116 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 AL118496.2-201ENST00000448300 230 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 RNU7-113P-201ENST00000459273 62 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.668-201ENST00000516233 93 ntBASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.17□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 SNORA32-201ENST00000384072 121 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms