Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL450471.1-201ENST00000447509 127 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC005786.1-201ENST00000588553 154 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 Y_RNA.788-201ENST00000622394 112 ntBASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC008163.1-202ENST00000636004 2889 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-478P-201ENST00000363904 110 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA16B-201ENST00000364674 135 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORD38.2-201ENST00000384470 69 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU1-148P-201ENST00000384472 162 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU7-48P-201ENST00000458875 63 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU7-137P-201ENST00000516788 62 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC015712.3-201ENST00000559380 164 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 FAM106DP-201ENST00000586416 501 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-480P-201ENST00000384332 107 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA2B-201ENST00000384583 137 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC114801.3-201ENST00000510231 177 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA25.13-201ENST00000516395 103 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR8065-201ENST00000620577 100 ntBASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 Y_RNA.98-201ENST00000363109 102 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-950P-201ENST00000384651 107 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU11-3P-201ENST00000391111 133 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-602P-201ENST00000411155 105 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC087499.7-201ENST00000441958 109 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-237P-201ENST00000515985 71 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR4769-201ENST00000584126 77 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR8055-201ENST00000610739 97 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-315P-201ENST00000362666 107 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORD114-10-201ENST00000363409 72 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR1236-201ENST00000408340 102 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC027119.1-201ENST00000440877 241 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AL161722.3-201ENST00000605789 2983 ntBASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 RNA5SP432-201ENST00000362480 116 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AP001362.1-201ENST00000625165 124 ntBASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.91□□□□□ -2.1
C1QTNF3-AMACRE9PGA6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 CYP3A52P-201ENST00000563326 91 ntBASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNY1P13-201ENST00000365030 105 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-482P-201ENST00000391068 107 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-447P-201ENST00000410293 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-355P-201ENST00000410427 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-791P-201ENST00000410467 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-705P-201ENST00000410601 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-860P-201ENST00000410860 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-785P-201ENST00000411324 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 SCARNA18B-201ENST00000458806 135 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 snoU13.11-201ENST00000459219 104 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 AC023790.1-201ENST00000482174 347 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
C1QTNF3-AMACRE9PGA6 MIR3134-201ENST00000579433 74 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms