Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SNORD116-21-201ENST00000384507 92 ntBASIC1.58□□□□□ -2.16
PTPDC1A2A3K4 snoU13.2-201ENST00000459201 104 ntBASIC1.58□□□□□ -2.16
PTPDC1A2A3K4 AC068338.1-201ENST00000565567 176 ntBASIC1.58□□□□□ -2.16
PTPDC1A2A3K4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
PTPDC1A2A3K4 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
PTPDC1A2A3K4 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
PTPDC1A2A3K4 AC007012.1-201ENST00000567192 175 ntBASIC1.57□□□□□ -2.16
PTPDC1A2A3K4 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
PTPDC1A2A3K4 RNU6-654P-201ENST00000364373 107 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 RNU6-880P-201ENST00000384526 107 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 SNORD77B-201ENST00000391112 67 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 MIR4679-2-201ENST00000578358 77 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 MIR6129-201ENST00000616087 109 ntBASIC1.56□□□□□ -2.16
PTPDC1A2A3K4 RNU6-1325P-201ENST00000364905 105 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 SNORA32-201ENST00000384072 121 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 SNORA80D-201ENST00000384488 135 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 RNU6-429P-201ENST00000384582 108 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 MIR588-201ENST00000384900 83 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 RNU6-910P-201ENST00000390844 107 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 RNU6-205P-201ENST00000390858 107 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 AL591704.2-201ENST00000421658 181 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 RNU7-35P-201ENST00000517174 62 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 AC087741.2-201ENST00000619415 172 ntBASIC1.55□□□□□ -2.16
PTPDC1A2A3K4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 RNA5SP237-201ENST00000410414 113 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 RNU7-62P-201ENST00000458856 62 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 MIR6740-201ENST00000618268 113 ntBASIC1.54□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 SNORD115-19-201ENST00000363098 82 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 SNORD115-18-201ENST00000363293 82 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 SNORD115-17-201ENST00000364612 82 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 RNU6-580P-201ENST00000365159 107 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 RNU6-215P-201ENST00000365169 102 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 SNORD20-201ENST00000384550 80 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 MIR563-201ENST00000385080 79 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 RNA5SP95-201ENST00000410319 137 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 SNORA70.22-201ENST00000517160 124 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 AL662814.1-201ENST00000617364 121 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 MIR7111-201ENST00000619751 72 ntBASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.53□□□□□ -2.16
PTPDC1A2A3K4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RNU7-21P-201ENST00000459430 62 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 SNORD79.1-201ENST00000516069 84 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RNU7-79P-201ENST00000516082 62 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 RNU6-589P-201ENST00000516485 107 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.281-201ENST00000364774 94 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 MRPL35P3-201ENST00000421557 364 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 RNU6-412P-201ENST00000516434 106 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 AC141846.1-201ENST00000568348 142 ntBASIC1.51□□□□□ -2.17
PTPDC1A2A3K4 AL589743.1-201ENST00000551932 2712 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 SNORD113.3-201ENST00000364630 78 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 SNORA2B-201ENST00000384583 137 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 MIR518E-201ENST00000385252 88 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 RPL39P34-201ENST00000477141 156 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 FAM71BP1-201ENST00000604431 523 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 AL035470.1-201ENST00000622571 220 ntBASIC1.5□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 MIR1276-201ENST00000408707 83 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 RNU7-90P-201ENST00000459216 62 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 RNU6-919P-201ENST00000516731 104 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
PTPDC1A2A3K4 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 SNORA63.5-201ENST00000363548 123 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 RNY1P13-201ENST00000365030 105 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 MT-TF-201ENST00000387314 71 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 SNORD111-201ENST00000408139 94 ntBASIC1.48□□□□□ -2.17
PTPDC1A2A3K4 AC063976.4-201ENST00000421971 163 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms