Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Mtag2-201ENSMUST00000058665 714 ntBASIC12.3□□□□□ -0.44
PdfS4R2K0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.3□□□□□ -0.44
PdfS4R2K0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PdfS4R2K0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.29□□□□□ -0.44
PdfS4R2K0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gm12382-201ENSMUST00000122005 922 ntBASIC12.29□□□□□ -0.44
PdfS4R2K0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.29□□□□□ -0.44
PdfS4R2K0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.29□□□□□ -0.44
PdfS4R2K0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Gm715-201ENSMUST00000117865 831 ntBASIC12.28□□□□□ -0.44
PdfS4R2K0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PdfS4R2K0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdfS4R2K0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.28□□□□□ -0.44
PdfS4R2K0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
PdfS4R2K0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
PdfS4R2K0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.44
PdfS4R2K0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdfS4R2K0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.27□□□□□ -0.45
PdfS4R2K0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Gm43183-201ENSMUST00000200632 547 ntBASIC12.27□□□□□ -0.45
PdfS4R2K0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms