Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Gm13312-201ENSMUST00000119631 718 ntBASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.21■□□□□ 0.19
Cldn3Q9Z0G9 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.21■□□□□ 0.18
Cldn3Q9Z0G9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldn3Q9Z0G9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldn3Q9Z0G9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn3Q9Z0G9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn3Q9Z0G9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Rprl3-201ENSMUST00000157400 290 ntBASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn3Q9Z0G9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cldn3Q9Z0G9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms