Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cx3cr1Q9Z0D9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cx3cr1Q9Z0D9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.58□□□□□ -0.23
Cx3cr1Q9Z0D9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm12441-201ENSMUST00000121806 588 ntBASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm36967-201ENSMUST00000193814 266 ntBASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cx3cr1Q9Z0D9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm10698-201ENSMUST00000182663 604 ntBASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cr1Q9Z0D9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Timm23-208ENSMUST00000226683 750 ntBASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cx3cr1Q9Z0D9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms